Gene Syncc9902_1351 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_1351 
Symbol 
ID3742080 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand+ 
Start bp1307752 
End bp1308240 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content46% 
IMG OID637771534 
Productrare lipoprotein A 
Protein accessionYP_377359 
Protein GI78184924 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0797] Lipoproteins 
TIGRFAM ID[TIGR00413] rare lipoprotein A 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.281508 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAGGATC GACTCCTGCT GCTCCTCTTA ATTGCAGCAC CAGCCTTCGG CAGCCCCTCT 
CGCGAAGAAT TCGTTGTCGA ACAAGTCATG CATCAATCAC AGCCAATCTC AGAGCGAACA 
CAATCCAAAC TATTGGTAAA AGCTATTTTT CAAGAGTCTT ACCTCCAAGA ACCAAACAAT 
CCAGCATTCA ACATCAAACA TCTCGGGATT GGAGTTGCGA GTTGGTACGG GCCTGGCTTT 
TATGGACGCC GAACAGCCAA CGGTGAAATA TTTCGGAAAG GAACTTTAAC GGCCGCACAT 
CGCACTCTTC CCTTTGGAAC AATTGTTCGC GTGATCAATT TAGAAAATGG AAGATCCGTT 
AATGTAAGAA TCAATGACAG AGGCCCATTT AAATATCACC GCGTGATTGA TCTCGCCCAC 
GGTGCAGCAA GTGAATTAAA CATGATGCAT GCCGGCGAAA TCAACGTCAG ACTTGAAGTC 
ATTGATTAA
 
Protein sequence
MKDRLLLLLL IAAPAFGSPS REEFVVEQVM HQSQPISERT QSKLLVKAIF QESYLQEPNN 
PAFNIKHLGI GVASWYGPGF YGRRTANGEI FRKGTLTAAH RTLPFGTIVR VINLENGRSV 
NVRINDRGPF KYHRVIDLAH GAASELNMMH AGEINVRLEV ID