Gene Syncc9902_1341 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_1341 
Symbol 
ID3743165 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp1299173 
End bp1299889 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content56% 
IMG OID637771524 
Producthypothetical protein 
Protein accessionYP_377349 
Protein GI78184914 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2227] 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGTTGG GCTGGACCTC GATGCAACGT GATCGGCGGC CCGAAGTCAT GGATCAGCCG 
GGGCTTGATC CTGCAGAGCA TGACCGCGCT CTTCAAGGTC TTCGTCGGAT TAATGGAATC
AGTCGCTGCG TGCCAGGGCT TTTTCGTCAA GTTGAGGCGC TCGCATACGA GACACCATCG
ACTCAGCTGA GTGTGCTGGA GCTGGCTTGC GGGGGAGGTG ACACGGCGAT TGAACTTGCT
GCGCTCGCCC GAAAACGCGA TTTAGATATA TCGGTTCAAG CCTGCGATCT GAATCCTGAA
GCGGTGCGGA TCGCCCGCCG CAATGTGGCC AGGTCAGACA GCAACGTTGG TGTGTTTGTT
GCCGATGCTC TTGACGCGTC TGGGTCCAAA CAATTTGACG TGGTGTACTG CACACTTTTT
GTTCACCATC TCGATCCACC CGATGTGGTT CGACTCCTTA CAGGGATGGC AGCTAGGGCT
CGTCGACTTG TGATTGTTGA CGATCTGATC CGAAGCCGTC TTGGTTATTC CTTGGCTTGG
ATGGGTACGC GACTGCTGAG CCGATCTTGG GTGGTGCATC ACGATGGCCC AATATCTGTG
AAGGCGGCTT TTACTCCCAC GGAGATTCTT GACCTCGCCT CTCAGGCTGG TTTGCGCGAC
TTTGGTTTGG AACGGACCTG GCCTGAGCGT TATCGGCTCT GCTGGAAACC CCACTGA
 
Protein sequence
MSLGWTSMQR DRRPEVMDQP GLDPAEHDRA LQGLRRINGI SRCVPGLFRQ VEALAYETPS 
TQLSVLELAC GGGDTAIELA ALARKRDLDI SVQACDLNPE AVRIARRNVA RSDSNVGVFV
ADALDASGSK QFDVVYCTLF VHHLDPPDVV RLLTGMAARA RRLVIVDDLI RSRLGYSLAW
MGTRLLSRSW VVHHDGPISV KAAFTPTEIL DLASQAGLRD FGLERTWPER YRLCWKPH