Gene Syncc9902_1296 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_1296 
Symbol 
ID3742377 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp1253286 
End bp1254194 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content56% 
IMG OID637771478 
Producthypothetical protein 
Protein accessionYP_377304 
Protein GI78184869 
COG category[E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0697] Permeases of the drug/metabolite transporter (DMT) superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTGACC ACCAGACGGC CTCCCCTTGG TGGGCCAGTG AGCAGGCAAA AGGCAGCCGC 
TCCCTGATTC TCAGTTCGCT TGCCTTCAGT CTGATGACCG TCTGCGTCAA GCAACTGAAT
GGCCGAATCC CCGTCACTGA AATCGTGCTC GTTCGCGCGA TCGTCAGCCT GGCTCTCACC
GGGATGGGCT TGCGATTGGC GGGGGTTAAG CCATGGGGCA CAGCCAAAGC CCGAGGGCTG
CTCTTCGCAA GAGGGATCGC AGGGAGCATT GCGTTGCTGT GCTTTTTTCA GGCCATCGAA
AAACTGCCCC TCGCCGCTGC AACGGTGTTG CAATACACCT ACCCAACGTT CACCGCCCTC
GCCGCCCTGT TTTTGCTCGG CGAATCCCTG CGCAAAAGGA TTGTTCTTGC GGTGTTGATG
GGCTGGGTTG GCATCACGTT TGTGGTTCAA CCGGACTGGT TGACCGGTGA CGTTCAAGCG
TTGCCGCTGA TACCAGCTCT CATCGGCATT TTGGGTGCGC TATTCACAGC CTTGGCTTAT
GTGAGTGTGC GCCGGTTATC GGCCACCGAA CACCCCCTGG TGATCATTTT GTATTTCCCA
CTCATTTCTG TTCCGATCAC CCTCCCCTGG GTAATCGGAA CAGGGGTTTG GCCAATGGGA
ATGGAGTGGA TATGGCTTCT GGGCATTGGC GTGTTCACGC AGTTAGGCCA AATCTGGGTG
ACGGATGGGC TGCGTCGCCT CCCCGCAGCA AGGGCCACAT CGATCAACTA CATCCAGGTA
GTTTTTGCCG CGAGCTGGGG TTGGTTGTGG TTTTCTGAAT CGATCAGCCT TTGGCAAATT
GGCGGGGGAG GACTCGTTTT AATCGCAACA ATGATCAGCC TATCTGCAAA AAATAATCAA
CCAACTTGA
 
Protein sequence
MPDHQTASPW WASEQAKGSR SLILSSLAFS LMTVCVKQLN GRIPVTEIVL VRAIVSLALT 
GMGLRLAGVK PWGTAKARGL LFARGIAGSI ALLCFFQAIE KLPLAAATVL QYTYPTFTAL
AALFLLGESL RKRIVLAVLM GWVGITFVVQ PDWLTGDVQA LPLIPALIGI LGALFTALAY
VSVRRLSATE HPLVIILYFP LISVPITLPW VIGTGVWPMG MEWIWLLGIG VFTQLGQIWV
TDGLRRLPAA RATSINYIQV VFAASWGWLW FSESISLWQI GGGGLVLIAT MISLSAKNNQ
PT