Gene Syncc9902_1246 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_1246 
Symboltsf 
ID3743050 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp1211401 
End bp1212060 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content55% 
IMG OID637771426 
Productelongation factor Ts 
Protein accessionYP_377254 
Protein GI78184819 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0264] Translation elongation factor Ts 
TIGRFAM ID[TIGR00116] translation elongation factor Ts 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.794499 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGCCG TAACCGCAAA GCTTGTCAAA GAACTGCGCG ACAAGACAGG CGCGGGAATG 
ATGGACTGCA AGAAGGCTCT TGCAGCAACA GACGGTGATA CCGACAAGGC TGTCGAGTGG
CTGCGCCAAA AGGGCATTGC CAGCGCTGAG AAGAAATCTG GAAGGACCGC CGCAGAGGGA
TCGATCGGGA GCTACATCCA CACCGGTGCT CGTGTGGGAG TGTTGATCGA AATCAACTGC
GAAACAGACT TTGTCGCCCG TGGCGACATG TTCCAAGAGC TGCTTCGGGA TGTGTCGATG
CAAGTCGCAG CATGTCCAAA CGTGGAATAC GTCACCACCG ATGAGATCCC ACCGGAGATC
AGCGAGCGCG AGAAAGCGAT TGAAATGGGT CGGGACGACC TAGAAGGCAA GCCCGAGAAG
ATGAAGGAAA AGATCGTTGA GGGTCGTATT GCCAAGCGCT TAAAAGAGCT GGCTCTGATG
GAGCAGCCTT TCATTAAAGA CAGTTCCATC ACCGTCGCTG AATTGGTCAA GCAGGCCGCC
GGCAAGATTG GTGAGAACGT CAAAGTGCGT CGATTCACCC GTTACACCCT CGGCGAGGGT
ATTGAAGTCG AAGACAACGA CTTCGCCGCG GAAGTGGCGT CCATGCAGAA CGCCGGCTGA
 
Protein sequence
MAAVTAKLVK ELRDKTGAGM MDCKKALAAT DGDTDKAVEW LRQKGIASAE KKSGRTAAEG 
SIGSYIHTGA RVGVLIEINC ETDFVARGDM FQELLRDVSM QVAACPNVEY VTTDEIPPEI
SEREKAIEMG RDDLEGKPEK MKEKIVEGRI AKRLKELALM EQPFIKDSSI TVAELVKQAA
GKIGENVKVR RFTRYTLGEG IEVEDNDFAA EVASMQNAG