Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9902_1246 |
Symbol | tsf |
ID | 3743050 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9902 |
Kingdom | Bacteria |
Replicon accession | NC_007513 |
Strand | - |
Start bp | 1211401 |
End bp | 1212060 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 637771426 |
Product | elongation factor Ts |
Protein accession | YP_377254 |
Protein GI | 78184819 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0264] Translation elongation factor Ts |
TIGRFAM ID | [TIGR00116] translation elongation factor Ts |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.794499 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCTGCCG TAACCGCAAA GCTTGTCAAA GAACTGCGCG ACAAGACAGG CGCGGGAATG ATGGACTGCA AGAAGGCTCT TGCAGCAACA GACGGTGATA CCGACAAGGC TGTCGAGTGG CTGCGCCAAA AGGGCATTGC CAGCGCTGAG AAGAAATCTG GAAGGACCGC CGCAGAGGGA TCGATCGGGA GCTACATCCA CACCGGTGCT CGTGTGGGAG TGTTGATCGA AATCAACTGC GAAACAGACT TTGTCGCCCG TGGCGACATG TTCCAAGAGC TGCTTCGGGA TGTGTCGATG CAAGTCGCAG CATGTCCAAA CGTGGAATAC GTCACCACCG ATGAGATCCC ACCGGAGATC AGCGAGCGCG AGAAAGCGAT TGAAATGGGT CGGGACGACC TAGAAGGCAA GCCCGAGAAG ATGAAGGAAA AGATCGTTGA GGGTCGTATT GCCAAGCGCT TAAAAGAGCT GGCTCTGATG GAGCAGCCTT TCATTAAAGA CAGTTCCATC ACCGTCGCTG AATTGGTCAA GCAGGCCGCC GGCAAGATTG GTGAGAACGT CAAAGTGCGT CGATTCACCC GTTACACCCT CGGCGAGGGT ATTGAAGTCG AAGACAACGA CTTCGCCGCG GAAGTGGCGT CCATGCAGAA CGCCGGCTGA
|
Protein sequence | MAAVTAKLVK ELRDKTGAGM MDCKKALAAT DGDTDKAVEW LRQKGIASAE KKSGRTAAEG SIGSYIHTGA RVGVLIEINC ETDFVARGDM FQELLRDVSM QVAACPNVEY VTTDEIPPEI SEREKAIEMG RDDLEGKPEK MKEKIVEGRI AKRLKELALM EQPFIKDSSI TVAELVKQAA GKIGENVKVR RFTRYTLGEG IEVEDNDFAA EVASMQNAG
|
| |