Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9902_1216 |
Symbol | |
ID | 3741808 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9902 |
Kingdom | Bacteria |
Replicon accession | NC_007513 |
Strand | + |
Start bp | 1176997 |
End bp | 1177965 |
Gene Length | 969 bp |
Protein Length | 322 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 637771396 |
Product | light-dependent protochlorophyllide oxido-reductase |
Protein accession | YP_377224 |
Protein GI | 78184789 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCACAA CGAAGCCGCT ACGAATTTTG ATGACGGGTG CCAATAGTGG CATCGGTGAA GCTGCGGCAC GCCACCTCCA GGAAAGCGGA CATGCCCTGA CTGTCGTCTG CAGAAGTCGT GAACGCGCTG AACAGAGCTT GGATTGGCTT CAAGACCCGA GCAAAATCCT GATTGCAGAT CTCGCAGATC TGATCGCTGT GAAAAAAATG GCTCATCAGC TTGGTCTCGA TGGCCAGCAG TTTGATGTTC TTGTTTTGAA TGCAGGTCTT CAATACGCCG GGGTCGATAC ACCCCGTTGG AGCCAACAGG GATTTGAACT CACCTGGGCT GTCAATCACC TAGCGCACCA GTGCCTCCTT CAGCTGGTCC TACCCCTCTT GCAAGACAGT CCGTCGCCGC GTGTGGTGAT TACAGCGTCG GAAGTGCATA ACCCCACGAC GGGAGGTGGT CGGGTCGGAC AGCCTGCTGG TCTTGGCACC CTGGCAGGAC TGAATCAAGG AAAAGGTGCA TCCATGGTTG ATGGCACCAG CCCCTTCAGT GCTGACAAGG CCTACAAAGA CAGCAAATTA TGCAATCTAT TGATGGGACT TGAACTCTCC CATCGACAAC CACAACTACC CGTTTTGTGC TGGAGTCCTG GCCTCGTTAT TCCTCGAAGC AAGGATGGTT TTTTCCGCGA GAGTCGGAAA GCAAACCCCT GGGGCCAAGC TGTATTCGGC TTCATCGCAA GAGATCTCTT TCGGCTCACA GAACAACCAG AACGGGCTGG GAACCTTCTT GTTTCCCTGG TAATGGGTCA TCACGATGCA ACGGGCATGC GCTACTTGAG CAATCACGTT GTAGCTCCTG GAAAACACAT TTTTGAATCG ACTGAACCCT CGCCAGAAGC AACGGACATG GATTTAGCCC GCACGCTTTG GCAACTCAGC GAAAACCTGA TCAAAACCAG TTTGCAAACC CCAGCCTGA
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Protein sequence | MTTTKPLRIL MTGANSGIGE AAARHLQESG HALTVVCRSR ERAEQSLDWL QDPSKILIAD LADLIAVKKM AHQLGLDGQQ FDVLVLNAGL QYAGVDTPRW SQQGFELTWA VNHLAHQCLL QLVLPLLQDS PSPRVVITAS EVHNPTTGGG RVGQPAGLGT LAGLNQGKGA SMVDGTSPFS ADKAYKDSKL CNLLMGLELS HRQPQLPVLC WSPGLVIPRS KDGFFRESRK ANPWGQAVFG FIARDLFRLT EQPERAGNLL VSLVMGHHDA TGMRYLSNHV VAPGKHIFES TEPSPEATDM DLARTLWQLS ENLIKTSLQT PA
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