Gene Syncc9902_1144 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_1144 
Symbol 
ID3743280 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand+ 
Start bp1111498 
End bp1112172 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content54% 
IMG OID637771324 
Producthypothetical protein 
Protein accessionYP_377152 
Protein GI78184717 
COG category[R] General function prediction only 
COG ID[COG1512] Beta-propeller domains of methanol dehydrogenase type 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.607759 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATGCCGC TGTTCCCCCG CCGTTTTGTT GCCGCGCTTC TGGCAATCAG CCTCTGCTTG 
TTCGTCTGCG TACCCGCAGG GCTAGCAATT TCGCCTTCCG AGCTGGGTGC GTCTCCTCCA 
GAGGAGCTCA TTCTCGACGA CGCTGATGTT TTTAGTCGCG CCAGTCGGAA TGAGTTGGAT 
TCGAAGCTGA AGGGCTTGGA AGATCAACGC GTCAATGCAC GTTTAATTAC TTTGCGGCGC 
CTTGATTACG GTTACAGCTT GAAGAGCTTC GGTGAAGAAC TGATGGCATC TTGGTCTGGG 
AAGAGCGAGA TCCCCCTACT CCTGATCCTG ATCGAAACAC AAAACAAGCG CGCTGCACTT 
CTCGCCGACT CAGCTTTGCA AAGTCAATTG CCCGAGTCGT TACTCACGAG TACGGCGCGA 
ACAACGATGA CTCTTCCCCT TCGTGACGGT GATCGCTACC GACAGTCATC GATCGACGGT 
ATTTCCCGTT TGTCAACTGT TCTTGCCGGT GGAGAAGACC CAGGTCCTCC TGAGGTGGTT 
GAGCGGGTGG CGCTTCCTAC CAACATTCCA ACGAAGGCGG AAACCGAAGA AAGTGATGCA 
ACTACTTGGA TCATTGTTTT ACTTGTGTTG GGCACGATTA TTCCGATGGC CACCTGGTGG 
GTCTTTTCCC GCTAA
 
Protein sequence
MMPLFPRRFV AALLAISLCL FVCVPAGLAI SPSELGASPP EELILDDADV FSRASRNELD 
SKLKGLEDQR VNARLITLRR LDYGYSLKSF GEELMASWSG KSEIPLLLIL IETQNKRAAL 
LADSALQSQL PESLLTSTAR TTMTLPLRDG DRYRQSSIDG ISRLSTVLAG GEDPGPPEVV 
ERVALPTNIP TKAETEESDA TTWIIVLLVL GTIIPMATWW VFSR