Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9902_0612 |
Symbol | |
ID | 3742654 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9902 |
Kingdom | Bacteria |
Replicon accession | NC_007513 |
Strand | + |
Start bp | 623478 |
End bp | 624290 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637770783 |
Product | HEAT repeat-containing PBS lyase |
Protein accession | YP_376624 |
Protein GI | 78184189 |
COG category | [C] Energy production and conversion |
COG ID | [COG1413] FOG: HEAT repeat |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.96054 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGGACG ATCGAAGCCA ACAACGGGAT CGAGGCCCCG CCAGCCTGTC GTTGGATCCA GATCTATTGG CGCGCGAGCT GGCTGCTGAA GAAAGCCTTG ATCCGCTCGA TGCGTTTGAG CCCGACGTAG CAGTTGATGA TGCTTCGCCA TCGATTGCTT TGGCCTGCGA TCAGGGCCTG CTCGCCCTCC GTGGCAACCA CGACCAGCGC CTGCAAGGGC TGCAAGTGTT CTGTGAACAT CGCGATCCCA GGGCGCTTCC CCTGTTGCTT CCCCTTCTGC AACGCCCTTG CCCAGTGGAG CGGATGAGTG CGGTGTATGC CCTAGGTCGT AATCCGTCGC CGCCGGCGGT GGAATCGCTG CTACGCCTTT TGCAGGTGGA TAGCAATGCC TACGTCCGCA AAGCAGCAGC TTGGAGCTTG GGGAATTATC CCGATGCGCC GATTCTGAAT CCCCTGATTC ATGCCCTGCA AACCGATGTT GCTGCGGTTC GGCTGTGGTG CCCTGGATCC TTGGCTGAGT CGGGTAGCCG TTCGCCTGCA AAAGCGGATC CGGCGGCGAG TCAATTAGTG GCCAGCCTTC AAATCGATAG TGAACCGGTG GTTCGTAGTA ATTGCATTTG GGCTTTGGGC CGTTTGATGG ATCATTTGGT TGAGCCTCGT CAGCAGGAGA TCGTTGAAGT GCTGGTGGAG TCGTTGTTGT ACGACGGTGA AAGTTCCGTA CAGGACGAGG CTCGAACCGC CCTTGAGCAG CTGGAAGACC CCATGGTTTT AGAGCGCCTC CAGACCTTGA TGAACGATGG ATTTCTGATC TAG
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Protein sequence | MTDDRSQQRD RGPASLSLDP DLLARELAAE ESLDPLDAFE PDVAVDDASP SIALACDQGL LALRGNHDQR LQGLQVFCEH RDPRALPLLL PLLQRPCPVE RMSAVYALGR NPSPPAVESL LRLLQVDSNA YVRKAAAWSL GNYPDAPILN PLIHALQTDV AAVRLWCPGS LAESGSRSPA KADPAASQLV ASLQIDSEPV VRSNCIWALG RLMDHLVEPR QQEIVEVLVE SLLYDGESSV QDEARTALEQ LEDPMVLERL QTLMNDGFLI
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