| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9902_0396 |
|---|
| Symbol | |
|---|
| ID | 3742832 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus sp. CC9902 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007513 |
|---|
| Strand | - |
|---|
| Start bp | 413012 |
|---|
| End bp | 414430 |
|---|
| Gene Length | 1419 bp |
|---|
| Protein Length | 472 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 637770567 |
|---|
| Product | phospholipase D/transphosphatidylase |
|---|
| Protein accession | YP_376410 |
|---|
| Protein GI | 78183975 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1502] Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.0001004 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTGTGCC TAGAGGATGT GCTGAAACTC AGCCCGCTGC TTCTTGGATT GGTAGTTTTT
TGCGGCTGCA GCCAACGCGG CGAGTTGGTT GGAGCCGCTT CAGTAGATCA GCTCGACGTT
CCAGACCAAA TCGCGGTGGG ATTCAACCAC CATCAGCGCA ACCGTTACCA GTCACCCCTC
TCAGGGGAGT GGCGCGACGG TGACGACATT GAGCAGATGC TGGTCCAAGC CATTGAGCTT
GCCCAACACG AAATTCTGGT CGCTGTCCAA GAGTTATCAA CGCCAACGAT TGCAGAGGCA
CTGATCGCAG CCCAGCATCG CGGGGTGACG GTTCAGGTGA TTCTTGAAAA CAACTACAGC
ACCCCCTGGA CGGAACAAAC ACCAAGCCAA CTCAAGTCCC ATCAACGCCA ACGCTGGCAT
CAGCTTGAAC AGCTTGCTGA TCAAAATAGG GATGGCACAA CCACCCCAGA GGAAGCCAAA
CGGGGTGACG CCATTGGGTT GCTGAGAGAC CATCACATCC CAATCATTGA CGACACGGAA
GATGGAAGTC GCGGCAGTGG CCTGATGCAC CACAAATTTG TGGTGATTGA TCGAACGATC
GTTCTCACAG GCAGCGCCAA TTTCACCAGT TCAGGCATAC ACGGCGATGC CAACCGACCC
AGAACACGCG GCAATGTGAA TCACATCCTG CGATTCCAGA GCGATGCGTT GGCAGCACTG
TTTCGGCAAG AATTCGGAAC CATGTGGGGA GATGGACCGG GGGGAAAGCA AAACAGCCGC
TTTGGCCTCC AAAAAGAATC CACTGGCGTC AGCACAGTGA TGGTGGGTGA AAGCCGCGTG
GACGTTTTGT TCACTCCCCA CCGAAAACAC AACCCAAAGC ATGGATTGAA CTGGGTCGAG
AAACAGTTGG ACGAGGCAGG CAAAAGCATC GACATGGCCT TGTTTGTGTT TACGGCACAA
CAACTGGCTG ATGCACTTCA ACGGAGAGTG AATGCTGGGG TGCAGATTCG ACTGATTGCC
GATCCAAGCT TCGCGAGCCG TTCATTTTCA GAAGTGCTCG ATCTTCTTGG CGTGGCTCTA
CCGGATCGCA ACTGCAAACT TGAACAAGAC AATCAACCCT TCAACAAAGG CCACAAGGGC
GTGGGAACCC CACGCCTCGC CCGCGGCGAC AAGCTCCACC ACAAATTCGC TGTAATCGAC
AACAAAATAG TGCTGACAGG GTCATTTAAT TGGAGCCCCT CAGCTGCCCA CACCAACGAC
GAAACACTGC TGGTGATTCA TTCAGATCTC CTCGCTAAAC ACTTCACTCG TGAGATGGAT
CGCCTCTGGG ACACCGCAGA GCTAGGGATC ACACCGCACA TCCAACGCAA ACTCGACCGT
CAGCGGATCC GTTGCGGCGA TGGCGTGGAG AGGGGTTAA
|
|---|
| Protein sequence | MVCLEDVLKL SPLLLGLVVF CGCSQRGELV GAASVDQLDV PDQIAVGFNH HQRNRYQSPL
SGEWRDGDDI EQMLVQAIEL AQHEILVAVQ ELSTPTIAEA LIAAQHRGVT VQVILENNYS
TPWTEQTPSQ LKSHQRQRWH QLEQLADQNR DGTTTPEEAK RGDAIGLLRD HHIPIIDDTE
DGSRGSGLMH HKFVVIDRTI VLTGSANFTS SGIHGDANRP RTRGNVNHIL RFQSDALAAL
FRQEFGTMWG DGPGGKQNSR FGLQKESTGV STVMVGESRV DVLFTPHRKH NPKHGLNWVE
KQLDEAGKSI DMALFVFTAQ QLADALQRRV NAGVQIRLIA DPSFASRSFS EVLDLLGVAL
PDRNCKLEQD NQPFNKGHKG VGTPRLARGD KLHHKFAVID NKIVLTGSFN WSPSAAHTND
ETLLVIHSDL LAKHFTREMD RLWDTAELGI TPHIQRKLDR QRIRCGDGVE RG
|
|---|
| |