Gene Syncc9902_0280 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_0280 
Symbol 
ID3742777 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp294374 
End bp295495 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content55% 
IMG OID637770447 
ProductNADH dehydrogenase subunit H 
Protein accessionYP_376296 
Protein GI78183862 
COG category[C] Energy production and conversion 
COG ID[COG1005] NADH:ubiquinone oxidoreductase subunit 1 (chain H) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTGAGCC CAGGACTGGA CCTGGAACTG AGTTTTAGCC AAGCAATGCA GGGTTTTGGC 
CTCTCCCCAG AGGTGGCTCG GTTGCTCTGG TTGCCCCTGC CAATGCTGCT CGTCCTTGTG
GCGGCGGTTG TTGGTGTGTT GGTGTCGGTG TGGCTGGAAC GAAAGATTTC TGCTGCCGTT
CAGCAGCGTG TTGGTCCTGA ATATGCCGGC GCTCTTGGCG TTCTTCAGCC TTTGGCCGAT
GGCCTGAAGC TGCTCGTCAA GGAAGACATC ATTCCTGCGC GAGCCGACAG TATTTTGTTC
ACTCTTGGTC CGATCCTCGT GGTCGTTCCG GTGATCGTGT CCTGGCTGAT TATTCCTTTC
GGTCAGAACC TTCTAATCAG CAACGTTGGT GTTGGGATCT TTCTTTGGAT CGCCTTCAGC
AGTGTGCAGC CGATTGGTCT ATTGATGAGT GGGTATGCCT CCAATAACAA GTATTCGCTC
TTAGGGGGGC TGCGCGCTGC AGCGCAGTCG ATCAGCTACG AAATCCCTCT GGCCTTGGCT
GTGCTGGCCA TCGTGATGAT GAGCAATTCC CTCAGCACGG TCGACATCGT CAACCAGCAA
ACCGGAGCCG GCATTCTGAG TTGGAATATT TGGCGTCAAC CCGTTGGTTT TCTGATCTTT
TGGATCTGTG CCTTAGCCGA ATGTGAGCGT CTTCCCTTTG ATCTTCCGGA GGCAGAGGAA
GAGCTTGTAG CGGGCTACCA AACCGAATAC GCCGGGATGA AGTTTGCCCT GTTTTACCTG
GCGGGCTACA TCAACTTGGT GCTCTCGGCC GTCTTGGTAT CGGTGCTTTA TCTGGGAGGT
TGGGGTTTCC CAATCCCTGT GGAGTGGTTG GCGGACTGGC TCCATCAACC CATTGATGCC
CCTGTTGTTC AGGTGATCAC AGGATCTGTT GGCATCATGA TGACGATCCT GAAGGCCTAC
CTCCTGGTTT TCATTGCGAT CCTGCTCCGG TGGACCACGC CTCGGGTTCG GATCGACCAG
CTGCTGGACC TGGGCTGGAA GTTCCTGCTT CCACTTGCGC TTGTGAATCT GCTGGTTACG
GCAGCTCTCA AGTTGGCTTT CCCTGTGGCA TTCGGCGGCT GA
 
Protein sequence
MVSPGLDLEL SFSQAMQGFG LSPEVARLLW LPLPMLLVLV AAVVGVLVSV WLERKISAAV 
QQRVGPEYAG ALGVLQPLAD GLKLLVKEDI IPARADSILF TLGPILVVVP VIVSWLIIPF
GQNLLISNVG VGIFLWIAFS SVQPIGLLMS GYASNNKYSL LGGLRAAAQS ISYEIPLALA
VLAIVMMSNS LSTVDIVNQQ TGAGILSWNI WRQPVGFLIF WICALAECER LPFDLPEAEE
ELVAGYQTEY AGMKFALFYL AGYINLVLSA VLVSVLYLGG WGFPIPVEWL ADWLHQPIDA
PVVQVITGSV GIMMTILKAY LLVFIAILLR WTTPRVRIDQ LLDLGWKFLL PLALVNLLVT
AALKLAFPVA FGG