Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9902_0239 |
Symbol | |
ID | 3743733 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9902 |
Kingdom | Bacteria |
Replicon accession | NC_007513 |
Strand | + |
Start bp | 251682 |
End bp | 253115 |
Gene Length | 1434 bp |
Protein Length | 477 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637770408 |
Product | deoxyribodipyrimidine photolyase |
Protein accession | YP_376257 |
Protein GI | 78183823 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0415] Deoxyribodipyrimidine photolyase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.52668 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAGCCT CCCGCGTTCT CTTTTGGCAT CGCCGCGATC TGCGCTTGGC CGACAACCTC GGCATTCAGG CCGCTGTTGA GATCAGTCCT GCGGTGACTG GGGTGTATGT GCTGGATCCA GCCCTGATCC AGCCTCCCCA GTCGTTGCCA CCCATGGCAC CGGCCCGGTT GTGGTTTTTG TTGGAGAGCC TGATCGAACT TCAGCAGCGT TGGCGTGCTG CTGGAAGCCG GTTGCTGATC TTGGAGGGTG ATCCCGTGCA GGTGCTGCCG CCGTTGGCAG AACGGCTTGG TGCCGAAGCT GTGGTCTGGA ACAGGGATGT GGAGCCTTAC AGCCGTGAAC GGGATCGGCA GGTGGCGAAG CGGTTGCAGG CTGATGGTCG AAAGGTGGTG GTGGATTGGG ATCAGCTGCT GATCCCCCCG GAGTTACTCA AAACGGGTGC TGGCGATCCG TATCGCGTGT ATGGACCTTT CTTGCGCAAC TGGCGGGGCA AGGTGCAGGC TCAACAGCCC ATCACCATTG AGGCTCCTTC AGGCCTTGTT GATCTGCATT CCGACTTGGT GCCGGATAGG GATCCCTTGG CTGCGCTACT CCATAGACAT GGATTCCAAG GCACGGAGAT CTGCCCGTGT AGGCCTGGCG AATCGGCAGC CCTGGAGCAG CTCACCCTTT TTGCGGATGG GCCCCTCTCC GGCTACGAAC CCGATCGGAA TTTCCCCAGC GTGGTTGGTA CGTCGTATCT CAGTGCGGCG TTGAGCGTTG GCACGTTGAG TCCCCGGCAA GCGTGGTGTG CGGCACAACA GGGTCGTGAC CATGCCCGTA GCGATGAACA GCGCACGGCG ATTGCTGTGT GGGAGCAAGA ACTGGGCTGG CGTGAGTTTT ACCAGCAAGC CTTGTTTCAT TTTCCTGAGC TGGCGGATGG TCCTTACCGG GAGCAATGGC GTCGATTCCC TTGGGAGAAC AACGAAGCGT GGTTTTCCTC TTGGCGGGAG GGGATGACGG GCATGCCGAT CATTGATGCG GCGATGCGTC AGCTCAATGA GAGCGGTTGG ATGCACAACC GTTGCCGCAT GATCGTGGCG TCATTCCTGG TGAAGGATCT GATCTGTGAT TGGCGTTGGG GCGAACGCGC CTTTATGGAA CTGGAGGTGG ATGGCGATTT GGCGGCGAAC AACGGTGGTT GGCAGTGGAG TGCCAGCAGT GGCATGGACC CCAAGCCGCT GCGGATTTTT AACCCCGCCA CCCAGGCCAC AAAATTTGAT GCCGATGGCG AGTACATCCG CCGTTGGGTG CCTGAACTAC GGCACGTGAA CACCAAAGAT CTACTTACCG GTGAAATTGG TGGTCTCGAG CGTCGTGGTT ATCCCGAACC TTTGATCACT CACAAAACCC AGCAGGCACT GTTTAAGACG CTTTACGCCA CTATCCGGTC TTGA
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Protein sequence | MTASRVLFWH RRDLRLADNL GIQAAVEISP AVTGVYVLDP ALIQPPQSLP PMAPARLWFL LESLIELQQR WRAAGSRLLI LEGDPVQVLP PLAERLGAEA VVWNRDVEPY SRERDRQVAK RLQADGRKVV VDWDQLLIPP ELLKTGAGDP YRVYGPFLRN WRGKVQAQQP ITIEAPSGLV DLHSDLVPDR DPLAALLHRH GFQGTEICPC RPGESAALEQ LTLFADGPLS GYEPDRNFPS VVGTSYLSAA LSVGTLSPRQ AWCAAQQGRD HARSDEQRTA IAVWEQELGW REFYQQALFH FPELADGPYR EQWRRFPWEN NEAWFSSWRE GMTGMPIIDA AMRQLNESGW MHNRCRMIVA SFLVKDLICD WRWGERAFME LEVDGDLAAN NGGWQWSASS GMDPKPLRIF NPATQATKFD ADGEYIRRWV PELRHVNTKD LLTGEIGGLE RRGYPEPLIT HKTQQALFKT LYATIRS
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