Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9902_0189 |
Symbol | |
ID | 3743639 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9902 |
Kingdom | Bacteria |
Replicon accession | NC_007513 |
Strand | - |
Start bp | 195900 |
End bp | 197261 |
Gene Length | 1362 bp |
Protein Length | 453 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637770358 |
Product | putative glycolate oxidase subunit (Fe-S) protein |
Protein accession | YP_376207 |
Protein GI | 78183773 |
COG category | [C] Energy production and conversion |
COG ID | [COG0247] Fe-S oxidoreductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.103269 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGAGC CACTCAGCGC CGACCCCACG TCATCCACAT CTCTCCCAGG CTTACCCGCC GGAGCCGCCG ATCCCTGTGT GCATTGCGGA TTTTGCTTAC CCACCTGTGC CAGCTATCGC GTTCTGGCCA GTGAGATGGA CTCACCCCGT GGCCGCATCC ATGCCCTGCG GGCGATCGAA GCCGGTGAAC TGGAACTCGA CGCCACCGTT GCAAGCCACT TCGACACCTG CCTGGGTTGT TATGCCTGCG TCACGGCATG TCCTTCTGGC GTCCGTTACG ACCAGCTGAT CGAAGCCACT CGACCGAAAC TGAACAACGC CAAATTGCGC AGCAGCTGGC AAATCAGTTT TCGTCAGCTG CTCCTGCAGG TGTTGCCCTA CCCACGCCGG CTTCGGGCTC TACTCCAGCC GCTGCGGCTC TACGCCGGCA CCCCCATCCA GGCCCTTGCC CGCCGCAGTG GCCTGACCCG CTTGTTTGGC CCAGGGATCG AAGCGATGGA ACAGCTGCTG CCATCCCTGG CAGCCACTGC CTTCGACGAT GCGTTGCCAA CGGTGAACCC TGCCAGCGCC CCCCGCCGCG GCCGGGTGGC GCTGCTGTTG GGCTGCGTCC AACGCTGCTT CGATCCATCC GTGAACACGG CCACGGTGAG CGTGCTTCAA GCGAATGGGT TTGAGGTGGT TCTCCCCCCT GATCAGGGCT GCTGCGGTGC CGTGAGTCAC CACCAAGGGG AGATGGAGCT CACCCGCCAA CTGGCTTCAG CCCTTGTTGA CAGCATGAAT GCGATCGAAG GAGAGCTCGA CGCGGTGCTG GTAGCAGCCT CCGGTTGCGG CCACACGATG AAGGCCTATG GCGAGATCCT GCAAAACAGC AACGGCTTCC GGGCGCCGGT TTTGGACGTG CATGAATTCC TTACCAACGT GGGGTTGAGC GACAGCTTTT CCGCCCAGCT GAAGCCCATC GCCAAGGCAG TGGCCATGCA TGACGCTTGC CACATGATCC ATGGCCAAGG CATTCAGCAA CAGCCACGCA CCCTGCTCGC CGCCATCCCT GATCTCGAAC TGAGAGAACC GATGGAAGCC GGCGTGTGTT GCGGAAGCGC CGGTATCTAC AACCTTGTAC AACCGGAGGA GGCCGCAGAG CTGGGAACGA TCAAGGCGAA CGACCTCAGC AACACTGGGG CAGCGCTCGT GGCCAGCGCA AACATCGGTT GCACCTTGCA ACTACGCCGG CATCTCCAGG GACGTCAGCC GGTGCACCAC CCGATGGAAC TGTTAGCAGC ATCAGCTGGC TTGCATCCGC TGCCAAGCCT CGAACAAAGT GCCTTCAGTA CCGAGGTTTC CCGGAAACGT GAGGATCGGT AA
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Protein sequence | MSEPLSADPT SSTSLPGLPA GAADPCVHCG FCLPTCASYR VLASEMDSPR GRIHALRAIE AGELELDATV ASHFDTCLGC YACVTACPSG VRYDQLIEAT RPKLNNAKLR SSWQISFRQL LLQVLPYPRR LRALLQPLRL YAGTPIQALA RRSGLTRLFG PGIEAMEQLL PSLAATAFDD ALPTVNPASA PRRGRVALLL GCVQRCFDPS VNTATVSVLQ ANGFEVVLPP DQGCCGAVSH HQGEMELTRQ LASALVDSMN AIEGELDAVL VAASGCGHTM KAYGEILQNS NGFRAPVLDV HEFLTNVGLS DSFSAQLKPI AKAVAMHDAC HMIHGQGIQQ QPRTLLAAIP DLELREPMEA GVCCGSAGIY NLVQPEEAAE LGTIKANDLS NTGAALVASA NIGCTLQLRR HLQGRQPVHH PMELLAASAG LHPLPSLEQS AFSTEVSRKR EDR
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