Gene Syncc9605_2425 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_2425 
Symbol 
ID3737752 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp2234047 
End bp2234760 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content62% 
IMG OID637777014 
ProductMg-protoporphyrin IX methyl transferase 
Protein accessionYP_382712 
Protein GI78213933 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2227] 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase 
TIGRFAM ID[TIGR02021] magnesium protoporphyrin O-methyltransferase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0288212 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCATCG ATCAGCTGCT GGAGCAGAAA CAGGCCGAGA AGAAGGAGGT GAAGGGCTAC 
TTCGAAACCA CGGGTTTCGA CCGCTGGAAC CGCATCTACA GCGACAGCGA TGACGTGAAC
AAGGTGCAGC GCAACATCCG CATCGGTCAC CAGAAGACCG TGGATGAAGT GCTGGCCTGG
ATCAAGGAGA GCGATGAACT CAGCGGCGTG AGTTTCTGTG ATGCGGGCTG CGGGGTGGGC
AGCCTGAGCC TGCCGCTGGC GGCGATGGGG GCCGGCTCGA TCAGCGCCAG CGACATTTCC
GAAGCCATGG CCCAGGAAGC GGAGCGCCGT GCACGCGAAG CCGGCCTCGA CATGGCCAAG
CTGAACTTCT TCGCCAGCGA CCTGGAAAGC CTGAGCGGCT CCTTCCACAC GGTGTGCTGC
CTGGATGTGT TCATCCACTA CCCCCAGCAA CCGGCCGAGG AGATGGTGAA GCACCTCTGC
AGCCTCACCG AAGGGCGCCT GATCGTGAGC TTTGCGCCTT ACACGCCGCT GCTGGCGCTG
CTGAAGGGCA TCGGCCAGTT GTTTCCCGGC CCCAGCAAAA CAACCCGGGC CTACACCCTC
AAGGAAGACG GGATCGTGAA AGCTGCCGAA GCCTGCGGCT TCAAGCTGGT GCGCCGCAGC
CTGAACAAGG CCCCCTTCTA TTTCTCCCGC TTGATCGAGT TCCGCAAAGC CTGA
 
Protein sequence
MAIDQLLEQK QAEKKEVKGY FETTGFDRWN RIYSDSDDVN KVQRNIRIGH QKTVDEVLAW 
IKESDELSGV SFCDAGCGVG SLSLPLAAMG AGSISASDIS EAMAQEAERR AREAGLDMAK
LNFFASDLES LSGSFHTVCC LDVFIHYPQQ PAEEMVKHLC SLTEGRLIVS FAPYTPLLAL
LKGIGQLFPG PSKTTRAYTL KEDGIVKAAE ACGFKLVRRS LNKAPFYFSR LIEFRKA