Gene Syncc9605_2237 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_2237 
Symbol 
ID3737968 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp2050037 
End bp2050714 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content60% 
IMG OID637776823 
Productsite-specific recombinase XerD-like 
Protein accessionYP_382529 
Protein GI78213750 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0311543 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.392069 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCATCA GCTCGGGCCC CCATAAGCCT TGTCCTGAGC GTTCTGGGCA TCAGAGCGCA 
ACTGCCTTGT CCTGTCCTTA TCAATCCGCT GAGCACCCAA ACCCCCGAAG AACAAGAATG
TCGGCACCAA AGCTGGCCAA ACCGCTGGCT GACTCTGATC TGACATCAGT TCTGGGTGTC
ATCAGTGCCG CGAAGGCAAA GGGGTCAGCC ATCGCAGCGC GTGACTACGT CATGGTCCGC
GGGTCGTATT TGCTCGGGTG CCGTGTATCG GAGCTGTGCC GCCTGCGGTG GGAGGACATC
GAACCGCTGG ATGAGGGTGG CAACGTTCGC CTCCTGGGTA AGGGGAGCAA GCCCCGAACC
ATACGCGTCA GCACCGACAC GCTGAAGCTG TTCGAGTCGT TGGGCCGCGG CGAGCCTGGG
GACTGGCTTT TCTCAAGTAA TAAAAGGAAT GGCCCATTGA CCCGTCAGGC GGTGGCCGCT
CGCATGGCGA TGTGGGGACG GGAGGCAAAC GTCCGGCTCC ACCCGCACCG TTGCCGCCAC
ACCCATGCGA CTCATGCAAT TCGGAGGGGC GTGGACGTTT TCACCCTTTC AGCGACGCTC
GGCCACAGCT CGACGGGAAC CACATCTCAC TACGTTCTTG CTGAGCCTGG TGAGAGTTCA
TCTCTCAAAT TGGGTTGA
 
Protein sequence
MAISSGPHKP CPERSGHQSA TALSCPYQSA EHPNPRRTRM SAPKLAKPLA DSDLTSVLGV 
ISAAKAKGSA IAARDYVMVR GSYLLGCRVS ELCRLRWEDI EPLDEGGNVR LLGKGSKPRT
IRVSTDTLKL FESLGRGEPG DWLFSSNKRN GPLTRQAVAA RMAMWGREAN VRLHPHRCRH
THATHAIRRG VDVFTLSATL GHSSTGTTSH YVLAEPGESS SLKLG