Gene Syncc9605_1872 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_1872 
Symbol 
ID3736444 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp1701413 
End bp1702573 
Gene Length1161 bp 
Protein Length386 aa 
Translation table11 
GC content67% 
IMG OID637776457 
Producthypothetical protein 
Protein accessionYP_382170 
Protein GI78213391 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.734 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCGCTGC TGTTTGCTCC GCTCGGCCTT GGACTTGCTG TGGCCTGGCT GGAGCTCCGC 
CATCGCCTCA GACCGGCCTC ACCGTTGCGG ATGACTCCGC GCGACTGGCG TGTGGATGAT
CTGGGCGCGC GGCTCCGCAT CGAAGGCGTG CTGGAGATCA GCAACCCCCA CCCCCGCATG
GAGGTCTTTG TGCCGGAGCT GCGGGTCGAG CCCGTGCTGC TGGGCTCCTC CGATCCCACC
GGCCTGGAGG TGAAAACGCG GATCATTGCC GAGCATCCCG ACGAGGAGAC CCGCGCAGAC
GGCTACTGGG CGGCCTACAT CGTCAAGGGA CGCAAGACCA CCCGTGCCCG GGTTTTGATC
GAGATCACCG GCCCGACGCC ATCGGCCCGG GTCGACAGCC TCTGGGTGGA TGCCCACTGG
GCGAATTACG GACCCTTCGG CCGTCTGCAG CGCCGTCAGG GCGTGCTGGT TCCCCTGACG
CGTCCTGAAC CCCTGCAGCC CGATCAAGTC CACTTCCGCC AGGGGGAAGG CTGCCGCGTC
TTGCCCCTTC GCACCCACCT GCTCGGGCCC CTGGATGACA CCATTGACGT CCTGCGCACC
TATGCCGCCG ATCTGGTGCA GCCCGGCGAC ATCCTCACCA TCGGCGAAAC CCCCGTGGCT
GTGATCCAGG GGCGCTACCG CCATCCCAGT GAGGTGGAGC CAGGCATGGT GGCGCGTCTG
GCCTGCCGTG TGTTCCACCC CACCAGCAGC TTGGCCACTG CCTGCGGCAT GCAGACCTTG
ATCGATCTGG TAGGGCCCAC CCGGGTGCTG GCCGCCTGGA TTGGGGGGCT GCTGATGAAG
CTGGTGGGCA TCCCCGGTGG CTTCTATCGC CTCGCTGGCG ACCAGGCCCG CTTGATCGAC
GACATCACCG GCACTACACC GCCATACGAC CAGACCATTG TTCTGGGGCC ATCCCGGGCT
GAGCAGTTCT GCCGTGATGC CTCCGCTGAA CTCGGGGTCG ACGTTGCCAT CGTCGATGTC
AACGACCTCG GCCGCGTGAA GGTGCTGGCC TCCAGCCCCG GTTGTGATGA GGGCTTGCTG
GGCCGGGCCC TGCGCCCCAA CCCTGCTGGC AATGCCAATG AACGCACTCC CCTGGTGTTG
GTGCGGCCAG GCCTGGAATG A
 
Protein sequence
MSLLFAPLGL GLAVAWLELR HRLRPASPLR MTPRDWRVDD LGARLRIEGV LEISNPHPRM 
EVFVPELRVE PVLLGSSDPT GLEVKTRIIA EHPDEETRAD GYWAAYIVKG RKTTRARVLI
EITGPTPSAR VDSLWVDAHW ANYGPFGRLQ RRQGVLVPLT RPEPLQPDQV HFRQGEGCRV
LPLRTHLLGP LDDTIDVLRT YAADLVQPGD ILTIGETPVA VIQGRYRHPS EVEPGMVARL
ACRVFHPTSS LATACGMQTL IDLVGPTRVL AAWIGGLLMK LVGIPGGFYR LAGDQARLID
DITGTTPPYD QTIVLGPSRA EQFCRDASAE LGVDVAIVDV NDLGRVKVLA SSPGCDEGLL
GRALRPNPAG NANERTPLVL VRPGLE