Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9605_1595 |
Symbol | |
ID | 3736700 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9605 |
Kingdom | Bacteria |
Replicon accession | NC_007516 |
Strand | - |
Start bp | 1464941 |
End bp | 1465645 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637776183 |
Product | 16S ribosomal RNA methyltransferase RsmE |
Protein accession | YP_381899 |
Protein GI | 78213120 |
COG category | [S] Function unknown |
COG ID | [COG1385] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR00046] RNA methyltransferase, RsmE family |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.377803 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.000639268 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGAATATCG TTGTTCTGAA CCGTTCGGAT TGGCTGGATG AACGGAAAGT TCGTCTTGTG GATCGGCGGG CGGATCACAT CCGTTCGGTG CTTCGGGCTG CGGTGGGCGA CAGCATCCTG GTTGGTGAGC TAGGTGGCGA TCTCGGCCAG GGCCGCATCT GCGCGCTCGA TGCAGATGCA GTGGTGCTGG AGGTGGAGCT CAACCAGCCA CCGCCGCCCC GCCATCGGTT CGACATTGTT CTGGCTCTGC CAAGGCCCAA GGTGCTGCGA CGTCTGTTCC GCACCGTGGC CGAATTCGGG GTGGCAAACC TTCACCTGAT CAACTGCGCT CGGGTTGAAA AGAGCTATTG GCAATCGCCT TTGCTCGCAC CAGAGAAGGT GAACGATGCG CTGCTTGCTG GGATGGAGCG CGCCAGCGAC ACGGTGGCGC CCCGGGTGCA TCAGCACAGG CGCTTTCGCC CCTTCGTCGA AGACCAGCTC AAGGATCTTT GTGCTGGACG GCCCTGCTGG ATGGCCCAGA TGGGGGCATC CCTTCCCTTG CGCGACACCC CAAGGGGGAC GGCCGTGGTG ATGGTGGGGC CCGAGGGCGG TTTTGTTCCG TTTGAACTGG AATTGGCCCA GGAGGTGATC GCGCAGCCCG TGCATCTGGG ATCGCGCACC TTGAGCGTGG ACACGGCCCT CACCGCCGCT CTGGCCCAGG GATGA
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Protein sequence | MNIVVLNRSD WLDERKVRLV DRRADHIRSV LRAAVGDSIL VGELGGDLGQ GRICALDADA VVLEVELNQP PPPRHRFDIV LALPRPKVLR RLFRTVAEFG VANLHLINCA RVEKSYWQSP LLAPEKVNDA LLAGMERASD TVAPRVHQHR RFRPFVEDQL KDLCAGRPCW MAQMGASLPL RDTPRGTAVV MVGPEGGFVP FELELAQEVI AQPVHLGSRT LSVDTALTAA LAQG
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