Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9605_1591 |
Symbol | |
ID | 3736696 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9605 |
Kingdom | Bacteria |
Replicon accession | NC_007516 |
Strand | - |
Start bp | 1461868 |
End bp | 1463454 |
Gene Length | 1587 bp |
Protein Length | 528 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637776179 |
Product | porin |
Protein accession | YP_381895 |
Protein GI | 78213116 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.411467 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00286278 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACGCTTG TTTGGCAACT GCTGGTGGCT CCTGCTGCCC TTGGCCTTCT GGCCCCTTTG GCTGTTGTCA ACAGCCCAGC AGCCAATGCC GCCGAGCTGA ACATCAACGA CGTTTCTGAT TACGCGGCTA CTGCCAGTGG CAACAGCCTT GATCAGGTCA CCAGCGTTAC CCAATTCTCT GACGTTTACC CCACCGACTG GGCCTATCAG GCTCTGGCCA ACCTGGTGGA GACCTACGGC TGCGTCGCCG GCTACCCCAA CGGCACCTTC CGTGGCAACC GGGCGATGAC CCGCTACGAA GCGGCTGCCC TGCTTAACGC CTGCCTCGAC CGGATCACCG AAGTGACCGA CGAGCTGCGT CGTCTGCTCA AGGAATTCGA AACCGAGCTG GCCATCCTCA AGGGTCGCGT TGACGGCCTC GAGGCCCGCG TCGGCGAACT GGAAGCCACC CAGTTCTCAA CCACCACCAA ACTCAATGGA CAAGCCACCT GGGTGTTCGG AGCCAGCTGC TTTAAGGGAT CCGCGTCCCG GCTGCGTTCC CAGAGCAATG AAGCGTTGGG CGGCACCACG TTCAACTACG ACCTTCAGCT GGGGTTGGCC ACCTCCTTCA CCGGCAAGGA TCAATTGACC ACGGTGTTGC GTGGCGGCAA CTTCGACGGA GACGGCAACG TCTTCGGCAG TGGAGGGCCG TCGGGCCTCG CCATCTTGGA AACTGCTTTT CAGGAGGGTG ATCGCCCCAA TCTGGTGGCG ATCGACAAAC TCTTCTATAC CTTCCCGTTG GGAGATGAGA TCACCATCAC CACCGGCCCG ATTGTTGGCC AGGAGGACAT GCTCGCGATC TGGCCCAGCG TCTATCCCAG TGATCCGATC CTTGATGTGC TCACGGTGAA TGGAGCTCCG GGGGCCTACA ACAAAAACAA AGGTGCGGGC GTGGGCATCA GCTGGGCCGC GGAAAGTGGA GCTCGCGCGT CGGCCAACTA TGTGGCGGCC AATGGTGCAT TAAGCGACAC CCGTTCCGGT GGTTTCGCCA CCGACGATGC GGGAGGGACC GGCACCCTGC AGCTGGGTTG GGAGGGTGAG AACTGGGGTG TTGCTGCCCT GTATTCAAAG GTTCAGAACG GTCAAGACCT GATCGTGTAT GCCACACCCT TCGCCAGTGA TCGCTTCAGT GATCGGGGCG AGACCCACGC CTATGGCCTC GGTGGTTTCT GGCAGCCGTT GGAGAGCGGT TGGCTTCCTT CGCTGTCGCT CGGTTGGGGC ATCAATCAAT CCGACACCCA GCGCAAGGGC CAGGTCAGCA CCAGTCAGTC CTGGAGGGCT GGACTGGAAT GGAGCGATAT GTTGATGGCA GGGAACAACG CCGGAATGGC TGTGGGCCAG CCTGTTTTTG CGACGGATCT GCGTGGTGGC GACACGGCTG CCGATGGCCA GTTCATCTGG GAGTGGTGGT ATCAGTTCCA AGTGACCGAC AACATCAGCG TCACCCCGGC GCTGTTCTAT CTGTCGCGAC CGATGGGTGA GCTCACACCG AATGGTTCAA CCTTCCAGCA ACTGGGCGGT CTGATCAAGA CGACATTTGT GTTCTGA
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Protein sequence | MTLVWQLLVA PAALGLLAPL AVVNSPAANA AELNINDVSD YAATASGNSL DQVTSVTQFS DVYPTDWAYQ ALANLVETYG CVAGYPNGTF RGNRAMTRYE AAALLNACLD RITEVTDELR RLLKEFETEL AILKGRVDGL EARVGELEAT QFSTTTKLNG QATWVFGASC FKGSASRLRS QSNEALGGTT FNYDLQLGLA TSFTGKDQLT TVLRGGNFDG DGNVFGSGGP SGLAILETAF QEGDRPNLVA IDKLFYTFPL GDEITITTGP IVGQEDMLAI WPSVYPSDPI LDVLTVNGAP GAYNKNKGAG VGISWAAESG ARASANYVAA NGALSDTRSG GFATDDAGGT GTLQLGWEGE NWGVAALYSK VQNGQDLIVY ATPFASDRFS DRGETHAYGL GGFWQPLESG WLPSLSLGWG INQSDTQRKG QVSTSQSWRA GLEWSDMLMA GNNAGMAVGQ PVFATDLRGG DTAADGQFIW EWWYQFQVTD NISVTPALFY LSRPMGELTP NGSTFQQLGG LIKTTFVF
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