Gene Syncc9605_1495 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_1495 
Symbol 
ID3737690 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp1391483 
End bp1392853 
Gene Length1371 bp 
Protein Length456 aa 
Translation table11 
GC content60% 
IMG OID637776084 
Productputative hydrolase transmembrane protein 
Protein accessionYP_381800 
Protein GI78213021 
COG category[V] Defense mechanisms 
COG ID[COG1680] Beta-lactamase class C and other penicillin binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.713415 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.585878 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCGCACTG CCTTGTTCTC AGCTGCAGCA GTGACCTTCA GCGCCGGGGC AGCCCTGGAA 
CCTCCATTGC AGAACCTGAC CAACCTCGCC AGGGCGGGCA CGAGCTTCAG CGCCAAACAG
CTCTGCAGCG GTGTGCTCAT GGCTGGAATG GATCCAAATC GGATGCTCAG GGAAGATCTG
GCCGCCGGCC AGGGGCTGAT CCAAACCAGG ATCGAACCCG GCGCTGGGCG CGTTGAAGCC
AGCGCCCTGT TCGGACTGTT CCGCTCTGAA GCCGTTCAGA ACGGAGAACG GGGCTGCACC
TGGCGGATGA ACGGGCAGCC ATCGCCACGG TTGTTCCGTC AGGCCACCCC AGGCAACAGA
GATCCCAAGT CAAGCGGAGG TCCCTGGCGC CTGGTCGACA TGGCTCCTGC AGAGCCACCG
GAGATCGATC GCCAGGCGCT GAACGATGTT CTCGATCGCG CCTTTGAGGA AAACGAGCCA
CTTGCACCCA AACGAACCCG TGCCGTTGTG GTGGTGCAGG ACGGCTGGGT GATCGCTGAG
CGCTACGCCG AAGGCATTCA GCCAAACATG CCCCTGATCG GCTGGTCGAT GAGCAAAAGC
ATCACTCATG CCCTGATCGG ACTTGCCGTA TACAAAGGAA TTCTGGATCC GGACAAGCCG
CCGAGCGTGC CCGAGTGGAG CGATCCAGAG GACCCACGTC GACGAATCAG CCTCGATCAA
CTGCTGCGGA TGAACAGCGG GCTGGCCTTT GAGGAATCGA CGGGAGCCCT GAACTCAGAT
CTGGTGCAAA TGCTCACCCA GGAAGCCGAC ATGGCAGGGT TCGCCGCCAG CCAGCCCCTC
ATCAAAAAAC CAGGCAAAAA GTGGAGCTAC TCATCCGGAA CCACCAACAT TCTCAGCCGG
ATCCTGAGGC ACGCCATCAA CGACGATCAG GACTACTGGG CCTTTCCCTC GCGGGCTTTG
TTCGCACCCC TGGGCATGAC GACGGCTCTG CTGGAAAGCG ACAACAGCGG AACTTTGGTG
GGCTCATCGC TGGCCTGGGC CAGCGGACGC GATTGGGCCC GATTTGGCCA GCTTTATCTG
GATCAGGGCC GATGGAACGG CAAACAACTT CTGCCCGCGA ACTGGGTTCA GCGGGCGCGA
ACGGCGTCGC GAGGATCCAA GAAGGGATAT GGAGCGCATT GGTGGCTCAG CCGCCGCAAA
TCTCGGCCTG ATCTCCCCAA CAACAGCTTT TCAGCGGAGG GCTACCAGGG ACAACTTCTG
CTGATTGTTC CATCCCAGCG TGCTGTGATC GTGCGTCTGG GACAGACACC GAACAAGGCA
GGATTTGATG TCAATGCTTT CGGGGCTGAT GTTCTCTCAG CCCTTCGATA A
 
Protein sequence
MRTALFSAAA VTFSAGAALE PPLQNLTNLA RAGTSFSAKQ LCSGVLMAGM DPNRMLREDL 
AAGQGLIQTR IEPGAGRVEA SALFGLFRSE AVQNGERGCT WRMNGQPSPR LFRQATPGNR
DPKSSGGPWR LVDMAPAEPP EIDRQALNDV LDRAFEENEP LAPKRTRAVV VVQDGWVIAE
RYAEGIQPNM PLIGWSMSKS ITHALIGLAV YKGILDPDKP PSVPEWSDPE DPRRRISLDQ
LLRMNSGLAF EESTGALNSD LVQMLTQEAD MAGFAASQPL IKKPGKKWSY SSGTTNILSR
ILRHAINDDQ DYWAFPSRAL FAPLGMTTAL LESDNSGTLV GSSLAWASGR DWARFGQLYL
DQGRWNGKQL LPANWVQRAR TASRGSKKGY GAHWWLSRRK SRPDLPNNSF SAEGYQGQLL
LIVPSQRAVI VRLGQTPNKA GFDVNAFGAD VLSALR