Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9605_1363 |
Symbol | uvrC |
ID | 3736298 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9605 |
Kingdom | Bacteria |
Replicon accession | NC_007516 |
Strand | - |
Start bp | 1277902 |
End bp | 1279887 |
Gene Length | 1986 bp |
Protein Length | 661 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637775955 |
Product | excinuclease ABC subunit C |
Protein accession | YP_381672 |
Protein GI | 78212893 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0322] Nuclease subunit of the excinuclease complex |
TIGRFAM ID | [TIGR00194] excinuclease ABC, C subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.205269 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.348926 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGGATGCTG CCTCTGGTGC ACCGCTGCTG ACGCAGCCCG AGCGTCTTGA ACGCCGCCTG AAGGAGATCC CCGCTGAGCC GGGTTGCTAT CTGATGCGGG ACTGCGACGA CCGGATCCTC TACGTCGGCA AGTCGAAGGC GTTGCGCAGC CGTGTGCGCA GCTATTTCCG CAGCCGCCAC GATCTGTCGC CACGGATCCG GCTGATGACA CGCCAGGTCT GTGAGATTGA GTTCATCGTC ACCGACAGCG AGGCGGAGGC CCTCGTCCTC GAGTCGAACC TGATCAAGAA CCATCAGCCG CACTTCAACG TGCTGCTGAA GGACGACAAG AAATACCCAT ACCTCTGCAT CACCTGGAGT GAGGCCTACC CACGGATTTT CATCACCCGT CGCCGTCGCT TCCGCAGCCC TCTCGACCGC TTTTACGGGC CCTATGTCGA TGTCGGCCTG CTGCGTCGCA CCCTGTTCCT GGTGAAGCGG GTGTTCCCGC TGCGGCAACG GCCCCGACCG ATGTACCCCG ATCGCACGTG CCTCAACTAC AGCATCGGGC GCTGTCCGGG GGTTTGCCAG GAAAAAATCA GCTCGGTGGA CTATCACCGC ACCCTCCGAA AGGTGGCGAT GGTGTTCCAG GGCCGCAGCG ATGAACTGCA GCATCTGCTT CAGGAGCAGA TGGAGCGGTA TGCCGAGCGG ATGGACTACG AGTCGGCGGC CCGGGTTCGG GATCAACTTC AGGGCCTGGA TCAGCTCACC GCCGACCAGA AGATGAGCTT GCCTGACTCC TCCGTGAGTC GGGATGTGCT GGCCCTTGCC TTCGACGAAC GCCTGGCAGC CGTGCAGCTG TTTCAAATGC GCGCTGGCAA GTTGGTGGGT CGTCTCGGCT ACACCGCCGA TGCCTCAGGC CTGGAACCTG GCCTGATCCT GCAACGGGTG ATCGAAGAGC ACTACAGCCA GGTGGATTCC GTCGAGGTGC CCCCCGAGCT GTTGGTGCAG CACGCTCTGC CCCAGCAGAA ACTGATGGAG GACTGGCTCA CGGAACAGCG GGAGCGTCGG GTTCAGATCC ACTGCCCCCA GCGCCAGCAG AAAGCCGATC TGATCGAACT GGTGCAGCGC AACGCGGAGT TTGAGTTGCT CCGTGCCAAG CAAGGTCAGG AGAAGCAGTC GTTGGCCACG GAGGATCTGG CGCAACTGCT GGAGTTGCCC ACCCCGCCGC GGCGGATCGA GGGGTACGAC ATCAGTCACA TCCAGGGCAG CGATGCCGTG GCGTCGCAAG TGGTGTTCAT CGACGGACTG CCCGCCAAGC AGCACTACCG CAAGTACAAG ATCCGCAGCA GCAGCATCCG CGCTGGCCAC AGCGACGACT TCATGGCGAT GGCGGAAATC ATGCGCCGTC GTTTTCGTCG CTGGGCCCGG GCGAAGGCGG AAGGGATGGA TGTGGGTGCT CTGCGTCACA AAGGCGGCAG CGCTCTGCAG ACCGACGGCC TCAACGACTG GCCCGATGTG GTGATGATTG ACGGCGGTAA GGGCCAGCTC TCTGCCGTGA TGGAGGCCCT TCGCGAGCTT GATCTGCATG AGGATCTCAA CGTCTGCTCC CTCGCCAAGC AGCGCGAAGA GGTGTTTCTC CCCGGTGAAA GCCAGCCGCT GGAGAGTGAA CCGGATCAGC TCGGGGTTGT GCTGCTTCGC CGCCTGCGGG ATGAAGCCCA CCGTTTCGCT GTCAGCTTCC ACCGCCAGCA GCGTGGTGAG CGGATGAAGC GGTCACGCCT CTCGGACATC CCCGGGGTTG GGCCCAAGCG GGTCAAGGAT CTCCTGGCTC ATTTCCATTC GATTGATGCC ATCCAGCTGG CATCGATTGA GACCCTGTCC AAGGCCCCGG GTGTGGGTCC GGCGCTGGCC CGCGACATCC ACGATTTCTT CCATCCTTCC GACGAAGGAA CCGACGCTGA TGCCAGGGCT GCTTTAGAAG AGCAGCCTCA GGAACTCTCC GCATGA
|
Protein sequence | MDAASGAPLL TQPERLERRL KEIPAEPGCY LMRDCDDRIL YVGKSKALRS RVRSYFRSRH DLSPRIRLMT RQVCEIEFIV TDSEAEALVL ESNLIKNHQP HFNVLLKDDK KYPYLCITWS EAYPRIFITR RRRFRSPLDR FYGPYVDVGL LRRTLFLVKR VFPLRQRPRP MYPDRTCLNY SIGRCPGVCQ EKISSVDYHR TLRKVAMVFQ GRSDELQHLL QEQMERYAER MDYESAARVR DQLQGLDQLT ADQKMSLPDS SVSRDVLALA FDERLAAVQL FQMRAGKLVG RLGYTADASG LEPGLILQRV IEEHYSQVDS VEVPPELLVQ HALPQQKLME DWLTEQRERR VQIHCPQRQQ KADLIELVQR NAEFELLRAK QGQEKQSLAT EDLAQLLELP TPPRRIEGYD ISHIQGSDAV ASQVVFIDGL PAKQHYRKYK IRSSSIRAGH SDDFMAMAEI MRRRFRRWAR AKAEGMDVGA LRHKGGSALQ TDGLNDWPDV VMIDGGKGQL SAVMEALREL DLHEDLNVCS LAKQREEVFL PGESQPLESE PDQLGVVLLR RLRDEAHRFA VSFHRQQRGE RMKRSRLSDI PGVGPKRVKD LLAHFHSIDA IQLASIETLS KAPGVGPALA RDIHDFFHPS DEGTDADARA ALEEQPQELS A
|
| |