Gene Syncc9605_1335 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_1335 
Symbol 
ID3736098 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp1248753 
End bp1250540 
Gene Length1788 bp 
Protein Length595 aa 
Translation table11 
GC content63% 
IMG OID637775927 
Producthypothetical protein 
Protein accessionYP_381644 
Protein GI78212865 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0432267 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCACC GCGACGTGGT GGTTTGGGGT GGTGGTTGCG GGGGCGTCGC TGCTGCACTG 
CAGAGCGCGA GATCAGGAGC TGAAACGGCA CTGTTCACCC CTGGTCCCTG GCTCGGGGGC
ATGGTGAGTT CGGCAGGAGT TTGCGCGCCG GATGGCCATG AACTGACCTG TTGGCAGACC
GGGATCTGGG GCGCCTTTCT GCGGCAGCTG GAGCTTGAGG AGCCGAGCGG GCTTGACCAC
AACTGGGTGA GTTGTTTCGG ATACAGGCCG CAAACGGCCG AACGGATCCT GCAACGCTGG
GTGGCAGCCG AGCCCAGGCT GGAGTGGCGT CCCCACTGCC GCTTGGAGCA GGTTCACGGC
CAGCAGGGAC GCCTCCACTC CCTGGAGATC CTCAGCGTGA AAGGCGTTGA AACCTTCTCC
GCCGATGTGT TTGTGGATGG CAGCGACCTG GGAGATCTGC TTGCCCTGTC GTCGGTTCCC
TTCCGCTGGG GTTGGGAAGC CAAGGAGATG TGGGATGAAC CCAGCGCCCC CGATCAGTCC
CGGCTCGAGA GCGACGCATT CTTTGAACAG CAACCGATTC AGTCACCCAC CTGGGTGGTG
ATGGGTCAGT TGCATGGGGA ACTCGCTCCG CAGCGTGCCG CTGGGGTACC GCGGTGTCCA
TTTGATCGGA GCACCGCCAG CTTCGGCCTC AAGGAAACCA TCACCTATGG CCGTCTACCC
AGCGGCCTGG TGATGCTGAA TTGGCCCCTG GAGGGCAACG ACTGGCACAA CGGCCTCGAT
CGAAGCCTCA GCGCTGATGG TGAGGTACGT GCGGAGCTGG CCCAGGAGAT GCAGAGGCAC
AGCAAGGATT TCCTCACGGC GCTGGAGGAA TGCAGCGACG GTTGGATCGC GGCCGGCAAC
GCCTTTCCAG GTGAAGATCC CAGCCTGGCG TTGATGCCTT ACTGGCGGGA AGGTCGGAGG
TTGATGGGTC GATCAACGGT CACGGAACGC GACCTCCTGC CGATGTCCAG AGGAGCCCTG
CGGGGACCGC TCCCGATCGA TGCCCAGGGA CGCTGCACCA GCATCGCTGT GGGCACTTAT
GCCAATGACC ATCACTACCC GCGTAAGGAC TGGCCCCTCG CACCGAAAAG TGTGCGTTGG
GGTGGACGTT GGAGCGGTAC GCCTTTCTGC ATCCCCTTCG ATGCCTTGAT CTCAGACGCG
ATCCCCAACC TCGTGATGGC GGAGAAAGGC TTCAGCGTCA GCCACATGGC CAATGGAGCC
ACGCGGTTGC AGCCTTTGAT CCTCAATCTG GGCCAGGTGG CGGGTCTGGC GGCGGCCATG
GCCGTTCGCC AGGGCTGTGA CCTTGGCGAT CTTGCAGTTG AGTCGATCCA GTCAGCCCTA
ATCCACGAGC CCAAGGCCCC TGCAGCGGTT CTCCCGATCT GGGACTGGCC GCACTGGCAT
CCGCACTGGG TCACGGCACA GGAGCAGGGC TTGGCTCAGC CTGAAATCCT GGACGCCATG
GGCTGCCTTT CAGATATTGA AGTCAGCATG CTGATGCCTC CTGGCATGAA CCAGGCGCCA
CACCAGTCGC ATGAGGTCGG TCTCAGTGGC GTGCTCACAG GCAACCTCCA GGAGGGCTAC
CAGCTGCAGA CCTCTGAAGG GATCTGGCCT CTGATCACCC TGGAACCGGC GATCCATCGC
TGGCTATCCG AACAGGATCA CTCGGGCCAA ACCCTGAACC TCCGCGGCAT CAAAAACATC
TGGGGGCCTT GGGTCCGGAT CACCGGGGTT CTGGATCAAG CCAACTGA
 
Protein sequence
MTHRDVVVWG GGCGGVAAAL QSARSGAETA LFTPGPWLGG MVSSAGVCAP DGHELTCWQT 
GIWGAFLRQL ELEEPSGLDH NWVSCFGYRP QTAERILQRW VAAEPRLEWR PHCRLEQVHG
QQGRLHSLEI LSVKGVETFS ADVFVDGSDL GDLLALSSVP FRWGWEAKEM WDEPSAPDQS
RLESDAFFEQ QPIQSPTWVV MGQLHGELAP QRAAGVPRCP FDRSTASFGL KETITYGRLP
SGLVMLNWPL EGNDWHNGLD RSLSADGEVR AELAQEMQRH SKDFLTALEE CSDGWIAAGN
AFPGEDPSLA LMPYWREGRR LMGRSTVTER DLLPMSRGAL RGPLPIDAQG RCTSIAVGTY
ANDHHYPRKD WPLAPKSVRW GGRWSGTPFC IPFDALISDA IPNLVMAEKG FSVSHMANGA
TRLQPLILNL GQVAGLAAAM AVRQGCDLGD LAVESIQSAL IHEPKAPAAV LPIWDWPHWH
PHWVTAQEQG LAQPEILDAM GCLSDIEVSM LMPPGMNQAP HQSHEVGLSG VLTGNLQEGY
QLQTSEGIWP LITLEPAIHR WLSEQDHSGQ TLNLRGIKNI WGPWVRITGV LDQAN