Gene Syncc9605_1254 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_1254 
SymbolhemA 
ID3736458 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp1174430 
End bp1175728 
Gene Length1299 bp 
Protein Length432 aa 
Translation table11 
GC content59% 
IMG OID637775844 
Productglutamyl-tRNA reductase 
Protein accessionYP_381564 
Protein GI78212785 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0373] Glutamyl-tRNA reductase 
TIGRFAM ID[TIGR01035] glutamyl-tRNA reductase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.094771 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATATCT CCGTCGTCGG CCTCAGTCAT CGCACGGCAC CGGTGGAGAT CCGGGAACGG 
CTCAGTATTC CTGAGCAGAC CATGGAGACT TCCCTTCAAT CGCTCCGCGG TAATGAGCAG
GTGCTCGAGG CATCAATCCT CAGCACCTGC AACCGGCTTG AGATTTACAC CCTGGTCCGC
AATCCGGACC TCGGCGTGTC TGCTGTCAGC GACTTTCTCA GCAGCCACTC CGGTCTTGAA
ACGGGCGAGC TGACGCCTCA CCTGTTCAGT TACCACCATG AAGACGCTGT CGATCACCTC
ATGCGGGTGG CAGCTGGTCT CGACAGCCTT GTGCTGGGGG AGGGACAGAT TCTGTCCCAG
GTGAAGAAAA TGATGCGGCT AGGTCAGGAG CACAAATCTC TGGGACCGAT CCTGAATCGA
TTGCTCACCC AGGCTGTTAC CACCGGCAAA CGCGTCCGCA GCGAAACCAA CCTCGGAACA
GGGGCTGTGT CGATCAGCTC TGCTGCCGTT GAGCTTGCTC AGCTCAAGCT CGGCCAATCC
CGGGGACTGG ATCATCTGGT CACCCTGGAA AGCGAGCAGA TCGCTGTTGT CGGTGCCGGG
CGCATGAGCC GTCTGTTGCT TCAGCACTTG CAGGCCAAGG GTGCCTCCGG TGTTGTTCTG
CTGAACCGCA CTGTTGAGCG GGCCGAGCAG CTCTCGGCCG ATTTCCCCGA TCTTCCTGTT
CAATGCAGGC CGCTCACGGA TCTGGATCAG TACCTGAGCA CCTGCTCGCT GATGTTCACC
AGCACCGCCG CTGATGATCC GATCATTGAT GCCGCACGTC TGGCTCCTCT GAACCGTCGC
AGCAAGCTGC GCCTGATCGA CATCGGTGTG CCGCGCAACA TCGCTGCCGA TGCTGCCGAC
GTGAACGGCG TTGAATCCCA CGATGTTGAC GACCTTCAAG AGGTCGTTGC CCGTAACCAG
GAAGCCCGTC AGGCCATGGC TCGGGAGGCA GAGCAGTTGC TTCAGCAGGA AGCGCAGCAG
TTCCTCGAGT GGTGGGACAG CCTTGAGGCC GTGCCGACCA TCAACCAGCT GCGGTCCTCG
ATGGAGTCGA TCCGTACGGA GGAACTCCAG AAAGCCCTCA GCCGAATGGG CCCTGACTTC
TCAGCCCGGG AACGCAAGGT TGTTGAGGCT CTAAGCAAGG GCATCATCAA CAAAATTCTC
CACACGCCGG TGACCCAGCT GCGGGCTCCT CAGACCCGTC AGGATCGCCA ACAGGCTCTT
CGAATTGTCG AAAGACTGTT CGATTTGGAA GCATCTTGA
 
Protein sequence
MHISVVGLSH RTAPVEIRER LSIPEQTMET SLQSLRGNEQ VLEASILSTC NRLEIYTLVR 
NPDLGVSAVS DFLSSHSGLE TGELTPHLFS YHHEDAVDHL MRVAAGLDSL VLGEGQILSQ
VKKMMRLGQE HKSLGPILNR LLTQAVTTGK RVRSETNLGT GAVSISSAAV ELAQLKLGQS
RGLDHLVTLE SEQIAVVGAG RMSRLLLQHL QAKGASGVVL LNRTVERAEQ LSADFPDLPV
QCRPLTDLDQ YLSTCSLMFT STAADDPIID AARLAPLNRR SKLRLIDIGV PRNIAADAAD
VNGVESHDVD DLQEVVARNQ EARQAMAREA EQLLQQEAQQ FLEWWDSLEA VPTINQLRSS
MESIRTEELQ KALSRMGPDF SARERKVVEA LSKGIINKIL HTPVTQLRAP QTRQDRQQAL
RIVERLFDLE AS