| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9605_1192 |
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| Symbol | secF |
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| ID | 3735881 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus sp. CC9605 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007516 |
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| Strand | + |
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| Start bp | 1116068 |
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| End bp | 1117057 |
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| Gene Length | 990 bp |
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| Protein Length | 329 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637775782 |
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| Product | preprotein translocase subunit SecF |
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| Protein accession | YP_381502 |
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| Protein GI | 78212723 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0341] Preprotein translocase subunit SecF |
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| TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR00966] protein-export membrane protein SecF |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGAAG CTTCGTCATC GGCACAAGCG GCCACGGTCC TCAGCCTGCG CTGGTCCCTC
AGCAGCATGC GCCGCAAGGT GTGGCTGATC TCTGGTCTAG TGGTTCTGAT CAGCCTGTTG
GGCTTGTTGC TCAGTTGGTT GGACCCTGCG ATTCATGCTC CCCTCCGTCC GGGTCTGGAT
TTCACCGGCG GCACACAGAT CCAACTGGAA CGCCGTTGTG ATGACGCCTG CGCTGAGCTC
AAGGCGATTG ATGTCTCGGA TGTGATCCGC AGCCTGGAGC TGCCTCAGGA GGCGGGCCAA
CCTCTCCCCA ACCTGGGCGC TCCCCGGGTG CAGCTTCTGG ATGGCGGTCA GTCGTTGTTG
CTGCGCCTGC CAACGTTGTC GGCTGCCCAG GGCCAAGCGG TGATTGAGGC GGTTGAACCC
GTTGCAGGGC CGTTCCTCTC CGGTGGTCAA TCGGTCGACA CGATCGGGCC GAGCCTGGGC
AAGCAACTGC TGCGCAGCAG CTTGATCTCT CTGTTGGTGG CGTTTGGGGG TATTGCGGCC
TACATCAGCT TCCGCTACGA CCGCCGCTAC TCCTTTCTTG CTCTGGTGGC GCTGGCCCAT
GACGTGGCGA TCGTCTGTGG TGTCTTTGCC TGGCTCGGAG TTGTGCTTCA GCTGGAGGTG
GACAGCCTGT TTGCGGTTTC ACTGCTGACG ATTGCCGGGT ATTCGGTGAA CGACACGGTG
GTGGTCTTCG ATCGCATCCG CGAACGCAGC AAGGACGCCC CCGATCTGCC GCTCTCACTG
CAGGTGGATC AAGCGGTTTC CGCCACATTG ACCCGCACGC TTTACACCAG CGGAACCACC
TTGCTGCCTC TCTTGGCGCT CGTGTTTTTC GGTGGAGCAA CGCTCTATTG GTTTGCGATC
GCCCTTGCCC TCGGGGTTGT CGTTGGTTCC TGGTCGAGCA TTGCCCTGGC ACCGTCGCTG
CTCACGCTCT GGGACCGCTC CCTTGACTAA
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| Protein sequence | MTEASSSAQA ATVLSLRWSL SSMRRKVWLI SGLVVLISLL GLLLSWLDPA IHAPLRPGLD
FTGGTQIQLE RRCDDACAEL KAIDVSDVIR SLELPQEAGQ PLPNLGAPRV QLLDGGQSLL
LRLPTLSAAQ GQAVIEAVEP VAGPFLSGGQ SVDTIGPSLG KQLLRSSLIS LLVAFGGIAA
YISFRYDRRY SFLALVALAH DVAIVCGVFA WLGVVLQLEV DSLFAVSLLT IAGYSVNDTV
VVFDRIRERS KDAPDLPLSL QVDQAVSATL TRTLYTSGTT LLPLLALVFF GGATLYWFAI
ALALGVVVGS WSSIALAPSL LTLWDRSLD
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