Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9605_0870 |
Symbol | trpC |
ID | 3736243 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9605 |
Kingdom | Bacteria |
Replicon accession | NC_007516 |
Strand | + |
Start bp | 841386 |
End bp | 842273 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637775470 |
Product | indole-3-glycerol-phosphate synthase |
Protein accession | YP_381193 |
Protein GI | 78212414 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0134] Indole-3-glycerol phosphate synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.474663 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGATCC GCCGTCGTCC CCCCAACCCC AAAGTGCGGG TGGCCCATCT CGAATATGCG GTGCCCCACG ACGACGAGGA ACCGCGTCAC ATTCTCGAGA AAATTGTCTG GGAAAAAGAC CGTGAGATCG ATGCCGCCCG CGACAAGGTT CCTCTCGACA ACCTGAAGCA GCAGATTGCC AAGCTTCCTC CCACCAAGGA TTTCCTGGGG GCGCTTCAGG CGGCCGCCAC GAAACCTGCG GTGATCGCTG AGGTGAAAAA AGCGAGCCCC AGCAAAGGGG TGATCCGTGA GGATTTCGAC CCGGTGGCGA TTGCCAAGGC CTATGCCTCT GGTGGTGCAA GCTGCCTCTC GGTGCTCACC GACAAGACCT TCTTCCAGGG CGGCTTTGAT GTCTTGGTGG AGGTGCGTCA GGCCGTTGAC CTGCCTCTGC TCTGCAAGGA GTTTGTGCTG AGCCCCTACC AGCTGTTCCA GGCCAGAGCG GCCGGGGCTG ATGCGGTGCT GCTGATCGCT GCCATCCTGT CGGATCAGGA TCTTCGTTAT CTCAACAAGG CTGCGGCGGC TTTGGGCCTC ACCGTGTTGG TGGAGGTTCA CGACGCCACC GAAATGGACC GGGTGCTGAG CATTGGCGGC TTCCCCTTGA TTGGAATTAA CAACCGTGAT CTGACCAGCT TCGAGACGGA TCTGGCCACG ACCGAGCGGC TGCTGGTCGA CTTCAACGAC CGGTTGAAGC AACAGGGGGT GTTGCTGGTG AGTGAATCAG GTCTGTTCAG CCGGGCCGAT CTCGATCGCG TGCAAGCCGC CGGTGCGGGG GCTGTGCTGG TGGGGGAAGC CCTGATGCGG CAGCAGGATG TTGAAGCTGG TCTGGTGCAG TTGATCCAGG CCGGTTAA
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Protein sequence | MEIRRRPPNP KVRVAHLEYA VPHDDEEPRH ILEKIVWEKD REIDAARDKV PLDNLKQQIA KLPPTKDFLG ALQAAATKPA VIAEVKKASP SKGVIREDFD PVAIAKAYAS GGASCLSVLT DKTFFQGGFD VLVEVRQAVD LPLLCKEFVL SPYQLFQARA AGADAVLLIA AILSDQDLRY LNKAAAALGL TVLVEVHDAT EMDRVLSIGG FPLIGINNRD LTSFETDLAT TERLLVDFND RLKQQGVLLV SESGLFSRAD LDRVQAAGAG AVLVGEALMR QQDVEAGLVQ LIQAG
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