Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9605_0106 |
Symbol | |
ID | 3735457 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9605 |
Kingdom | Bacteria |
Replicon accession | NC_007516 |
Strand | + |
Start bp | 104871 |
End bp | 105617 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637774685 |
Product | rod shape-determining protein MreC |
Protein accession | YP_380437 |
Protein GI | 78211658 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1792] Cell shape-determining protein |
TIGRFAM ID | [TIGR00219] rod shape-determining protein MreC |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.73351 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCCCAA CGCTCCGTCC CGGCAAAAGC CGCTGGCGTG GATTGGGGCA GCTCACCCCC TGGCTGCTTC TGGTGGTGGG GCTTCTTCTG GTGCGTCTGA GCAAGGGCGC TGGTTTCAGC GATGCATACG CTCTGCTTAG CCGACCCTTC TGGCCTGGGC CTGCCCAGAG GGAATGGGTG ACCGCTGCGG CGGATCTTGA GGAGCGCTCT CGCCTGCAGC TGTTGGAAGA CGACAACCGT CGTCTGCGTG GACTGTTGGA GCTCCAGCAA CAAGGGGCTG CAGATGGGGA GGTGTCAGCT GCTGTGATCT CCCGCTCGTC GCGGGGTTGG TGGCAGCAAC TGCAGTTGGG CAAGGGCTCG CTGCAGGGCA TCGGTCAGGG CGATGCGGTT TTGGGTCCAG GTGGTCTGGT GGGGCGTATC GCCAGCGTGA CCCCGGCGAC GGCGCGGGTG AAATTGCTCA CCGCCCCTGG CCATGAGATT GGTGTGTGGC TGCCCCGCAG CCGCCGCCAC GGATTGCTGG TGGGCCGCGG CAGCAGTCGC CTCTCGCTTC GTTTCATCGA CAAGGATCCT GACGTGCGTC CGGGGGATCT CGTCGCCACG TCGCCGGCCA GCACCCTGTT GCCACCCAAC GTTCCGGTGG GGGTGGTCCA GTCGGTGGAC GAGCAGACGG TTCCCGCCCC CACGGCGGTG GTGCAGTTGA TCGCTGCACC GGAGGCGATC GATTGGGTGC AGGTGCAGAC GCGTTGA
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Protein sequence | MAPTLRPGKS RWRGLGQLTP WLLLVVGLLL VRLSKGAGFS DAYALLSRPF WPGPAQREWV TAAADLEERS RLQLLEDDNR RLRGLLELQQ QGAADGEVSA AVISRSSRGW WQQLQLGKGS LQGIGQGDAV LGPGGLVGRI ASVTPATARV KLLTAPGHEI GVWLPRSRRH GLLVGRGSSR LSLRFIDKDP DVRPGDLVAT SPASTLLPPN VPVGVVQSVD EQTVPAPTAV VQLIAAPEAI DWVQVQTR
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