Gene Syncc9605_0106 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_0106 
Symbol 
ID3735457 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp104871 
End bp105617 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content66% 
IMG OID637774685 
Productrod shape-determining protein MreC 
Protein accessionYP_380437 
Protein GI78211658 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1792] Cell shape-determining protein 
TIGRFAM ID[TIGR00219] rod shape-determining protein MreC 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.73351 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCCAA CGCTCCGTCC CGGCAAAAGC CGCTGGCGTG GATTGGGGCA GCTCACCCCC 
TGGCTGCTTC TGGTGGTGGG GCTTCTTCTG GTGCGTCTGA GCAAGGGCGC TGGTTTCAGC
GATGCATACG CTCTGCTTAG CCGACCCTTC TGGCCTGGGC CTGCCCAGAG GGAATGGGTG
ACCGCTGCGG CGGATCTTGA GGAGCGCTCT CGCCTGCAGC TGTTGGAAGA CGACAACCGT
CGTCTGCGTG GACTGTTGGA GCTCCAGCAA CAAGGGGCTG CAGATGGGGA GGTGTCAGCT
GCTGTGATCT CCCGCTCGTC GCGGGGTTGG TGGCAGCAAC TGCAGTTGGG CAAGGGCTCG
CTGCAGGGCA TCGGTCAGGG CGATGCGGTT TTGGGTCCAG GTGGTCTGGT GGGGCGTATC
GCCAGCGTGA CCCCGGCGAC GGCGCGGGTG AAATTGCTCA CCGCCCCTGG CCATGAGATT
GGTGTGTGGC TGCCCCGCAG CCGCCGCCAC GGATTGCTGG TGGGCCGCGG CAGCAGTCGC
CTCTCGCTTC GTTTCATCGA CAAGGATCCT GACGTGCGTC CGGGGGATCT CGTCGCCACG
TCGCCGGCCA GCACCCTGTT GCCACCCAAC GTTCCGGTGG GGGTGGTCCA GTCGGTGGAC
GAGCAGACGG TTCCCGCCCC CACGGCGGTG GTGCAGTTGA TCGCTGCACC GGAGGCGATC
GATTGGGTGC AGGTGCAGAC GCGTTGA
 
Protein sequence
MAPTLRPGKS RWRGLGQLTP WLLLVVGLLL VRLSKGAGFS DAYALLSRPF WPGPAQREWV 
TAAADLEERS RLQLLEDDNR RLRGLLELQQ QGAADGEVSA AVISRSSRGW WQQLQLGKGS
LQGIGQGDAV LGPGGLVGRI ASVTPATARV KLLTAPGHEI GVWLPRSRRH GLLVGRGSSR
LSLRFIDKDP DVRPGDLVAT SPASTLLPPN VPVGVVQSVD EQTVPAPTAV VQLIAAPEAI
DWVQVQTR