Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_4912 |
Symbol | |
ID | 6119293 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 5905960 |
End bp | 5906601 |
Gene Length | 642 bp |
Protein Length | 213 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641636497 |
Product | lysine exporter protein LysE/YggA |
Protein accession | YP_001763256 |
Protein GI | 170729230 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1280] Putative threonine efflux protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.15938 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGATC TCGCTCTACT CCCTCTCTAT ATCACAACCG TTATAGCGCT ACTTTTGATC CCTGGCCCTG ACATGTTGTT AATCGCCAGT TCAAGCCTTA GTTATGGCAA AAAAGTAGGT CTTTATGCCA GTCTTGGCAA TGCCACCTCA GGATTACTGC TCACCCTGTT AGCGGCAATG GGAGTTTCAG CCTTAATCGC CATGAACCCG ATGGCACTGC AGCTACTGCG CATATTAGGC GGCGCTTATC TATTAAAGAT GGGCTGGGAT TGCATGCGTG CTGGGCCTAT TGATGCTCCC GAGGTGGCTC AGGATAATAA TTTAGCTAAA ATTCTCTATC GCCGCGCCGT ATTCAGCAAT CTGCTCAACC CTAAGGCCCT GCTGTTTTTT GTGCTGTTTC TGCCCCAATT CGTGTCGGCA GAGTTAACGG CCAGCTCAGG CGAACAGATG CTGGCATTGG GTCTACTGCT AAATGTGATG GGATTACTGT TTAATCTCTT GCTGGTGGGC ATGGTGGGAA GCTTAGGAAA ACCGCTACTG AAAAATGAGA AGTTTAGAGC CAATCAGAAC AAGTTTATGG GACTGATCTT CTTCACCTTA GCCATCTGGT TACTGGCCTC TCAAGTACAG ACCATGAGCT AA
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Protein sequence | MIDLALLPLY ITTVIALLLI PGPDMLLIAS SSLSYGKKVG LYASLGNATS GLLLTLLAAM GVSALIAMNP MALQLLRILG GAYLLKMGWD CMRAGPIDAP EVAQDNNLAK ILYRRAVFSN LLNPKALLFF VLFLPQFVSA ELTASSGEQM LALGLLLNVM GLLFNLLLVG MVGSLGKPLL KNEKFRANQN KFMGLIFFTL AIWLLASQVQ TMS
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