Gene Swoo_4861 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_4861 
Symbol 
ID6119238 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp5850415 
End bp5851701 
Gene Length1287 bp 
Protein Length428 aa 
Translation table11 
GC content44% 
IMG OID641636442 
Producthypothetical protein 
Protein accessionYP_001763205 
Protein GI170729179 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAGGT CTTCGGTGAT AAAGTTGACG ATTAATCGCT TCGATGGAGC GGTGAGGCTC 
TGGCTGTTTG ATGTAGTCTG TGCCAGTTTT TTTGGGGTAG CGCTGCTCGG GTTGCTCCTG
CTATTGCCTA TCTTTTGGTT TGAAAAGTTT GATGTCATCC CGTTAATGCT CAGTATGTTT
CAAGTTTCTG TCTCTATTTC AGTCGCTTGG CAGTTAAACA GATTAGCCGC GACAGAGTGG
TCGATACTTA TTCCTCGGTA CCGAGGTAAC CTTCTGTTTC AGGCAGCCAC TCTTCTTCTT
GTCTCTTTTC TTATCTGCGC TCTGATATCG CTGGTTTCAG GAGCTGATGG TAGTTTTACG
CAACTTCAGT TGGCTACCGC AGCAGGGTTA ATTTTTATCT ACCTTTGTTT GATTAAAGTG
CAAACCTACT ATTGGTCTGT TCTGCTCTAT CTTTTTCTGA TGTCACTCTC ATCTTTAGCC
AGCCAAATAC CTACTGAGAT CAATATTCCC CTATTTGTGG CTAATGGCGT ACTGGCTTGG
TTGTTATGGC AAAAAGCGAA TGGAAACCCT TGGCACCCAG ATGCCAGATC TGTCTATCTC
AATGCACAAG AGATGGGAGG AGTTTGGCTG CCAGGGCTTA AATCAAATCC CCAATTAGTT
AAGTTTGAGC TTTGGTTACA TCCAGTCAAC TTCTTTATGG GGCCTTTATT GACTATATTG
CTGCTCGCTA TGCCTGTTGT GACTTTGGTC GTTGCGGGCT TATCTAGCGC GATTGGAGGA
GATATTCCCG CTCTGTTTCT CTATACCCAG TTTGCTTGTG TAGCCTGTAG TATGGTGCAT
TGGAGTCGCA TTCATCGCTG GCGTGCAGTG GAGTCGCTTT ACATGTTGCC GGGATTTGAC
GGTAAACAGG GGATGAGAGA TGCCTTTAAT CTTGGCCAGG TTAAGCTGCT AATTTTATTG
GTCTCTATGA TGGGGTTAGT GGCAGCTGTG ATAAGCCTAT TTGAGCCATT GATTACTATA
GGTGTTTGGT TTCACCTCGT ATTAAGTACA CTTTTTGGCT GCGGCCTTAT TTTAGGTGTT
GGTAGCGGGT GTAAAAATGC GTTGCAGCTT TCGTTATTGA TGTTGATTAT TATCTGCCAA
TCTGTGTGGA TATCGACCTC TTTAGGTCAA ATTAGCGATG GTGGTGAAAT TTGGCTTTGG
TTAAGTATTG ATATCATTCT TATGGTTTTT TCTTTTGTAA CTCTATGGTG GGGAAGTAAA
AAGCTTTGGG ATGGTGACTT TTTCTAA
 
Protein sequence
MSRSSVIKLT INRFDGAVRL WLFDVVCASF FGVALLGLLL LLPIFWFEKF DVIPLMLSMF 
QVSVSISVAW QLNRLAATEW SILIPRYRGN LLFQAATLLL VSFLICALIS LVSGADGSFT
QLQLATAAGL IFIYLCLIKV QTYYWSVLLY LFLMSLSSLA SQIPTEINIP LFVANGVLAW
LLWQKANGNP WHPDARSVYL NAQEMGGVWL PGLKSNPQLV KFELWLHPVN FFMGPLLTIL
LLAMPVVTLV VAGLSSAIGG DIPALFLYTQ FACVACSMVH WSRIHRWRAV ESLYMLPGFD
GKQGMRDAFN LGQVKLLILL VSMMGLVAAV ISLFEPLITI GVWFHLVLST LFGCGLILGV
GSGCKNALQL SLLMLIIICQ SVWISTSLGQ ISDGGEIWLW LSIDIILMVF SFVTLWWGSK
KLWDGDFF