Gene Swoo_4758 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_4758 
Symbol 
ID6119135 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp5742241 
End bp5743035 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content43% 
IMG OID641636339 
Productmethyltransferase type 11 
Protein accessionYP_001763102 
Protein GI170729076 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2227] 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000133874 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGGACTATT TAGCAGTAAA TAAAAGCGCA TGGGATAAAC GTACCAAGGT TCATGTTGGT 
TCAAAATTCT ATGATGTTGA CGGTTTTCTC TCTGGAAATA GTGCCTTACA GGAAATTGAG
TTTGAAGAGC TAGATGTAAA GGGCAAGAGT TTATTACATC TACAGTGCCA TTTTGGCTTA
GATACTCTCT CATGGGCTCG GGAGGGGGCA GAGGTGACTG GAATCGATCT CTCTTCAGTT
GCTATCGAGC AGGCAAGAGA GTTGGCAGTA AAGAGCCAGT TAGAAGCCAA CTTTATCTGT
AGCGATCTCT ATAGTGCGGC GGACAAGCTT GAGCGTCAGT TTGATATTGT GTTTACCTCA
TATGGTGCTA TCTGTTGGTT GCCTGATTTG AACAGATGGG CCCAAATGAT CAAGCAGAGT
TTAAAGCCTG GTGGTGAGTT TTATATGGCT GAGTTTCATC CTCTTGAGGC TCTGTTTGAC
GGTTATAGCT ACTTTGCACA AGATGAGCCC GATGTCGATG AAGAGGGGAC ATACACAGAG
AACTGTAGCG GTGAGAAAGA GACTTTAGTG AGCTGGCCTC ATCCAATCTC AGAGGTCTTC
AATGCACTTA TTGCTGCTGG TCTTGAGATT AAACGCTATA ACGAGTTTGA TTTTAGTCCC
TATGATGCGT TTGCAAACCT TGAGAAAGAG TTAGTGACAG ATAAAAACGG TAAACAACAT
ACCCGTTACG CGATGAAGCA TAATGATCAA CGAGTACCTC TGGTTTATTC AATCTCTGCG
ATAAATAATC CCTAG
 
Protein sequence
MDYLAVNKSA WDKRTKVHVG SKFYDVDGFL SGNSALQEIE FEELDVKGKS LLHLQCHFGL 
DTLSWAREGA EVTGIDLSSV AIEQARELAV KSQLEANFIC SDLYSAADKL ERQFDIVFTS
YGAICWLPDL NRWAQMIKQS LKPGGEFYMA EFHPLEALFD GYSYFAQDEP DVDEEGTYTE
NCSGEKETLV SWPHPISEVF NALIAAGLEI KRYNEFDFSP YDAFANLEKE LVTDKNGKQH
TRYAMKHNDQ RVPLVYSISA INNP