| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4754 |
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| Symbol | |
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| ID | 6119131 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 5736708 |
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| End bp | 5738591 |
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| Gene Length | 1884 bp |
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| Protein Length | 627 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641636335 |
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| Product | peptidase M14 carboxypeptidase A |
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| Protein accession | YP_001763098 |
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| Protein GI | 170729072 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2866] Predicted carboxypeptidase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0297814 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.000000035744 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGGATATGC GTTTAGCCCC TCTATCAATC ATTACTCTAC TAACGATCAG CGCAAGCAGT
ACCACCAGCA CATTTGCCAC TGCAAATGAT ACCCAAACAG CCACAGATAA CACTCCCAAA
ACTGCCACAC CACAAATTGC CAACAGTTAC ATCAACGATA AAATATTGCC ACCTGCTATC
GAGTGGCATG GCAAGAGTGA AGAGCTGCTA CTCGGCGCCG ACGCTGAATG GGCGACTCCC
TTCGAACAAC ATGGTCTAAA AACCAGCCCG AGCTATGATG AAACCTTTAT CTGGTTAGAT
AAGCTGATCG CCCAGAGCGA TAAGCTGAAG AAAGTGAGTA TAGGTAAGAG CCCACAAGGA
CGAGATATCT GGATGATTAT CGCCTCACAA GAGGGTGCAG CCACACCAGA GACATTAGCT
AAAAATGACA AACCCAGCGT ACTGGTACAA GCAGGGATCC ACTCAGGTGA GATCGATGGG
AAAGACGCAG GCATGATGCT ACTGCGTGAT ATTATCATTG GTGATAAAGG CGAGTTGCTG
AATAAGACTA ATCTACTCTT TGTGCCCATT TTCAGTGTTG ATGGCCATGA ACGTTCGACA
CAATACAATC GTGTTAACCA ACGTGGGCCA CTGGATATGG GCTGGCGAAC TACAGCCAAC
AACCTCAACC TGAATCGAGA TTACGCTAAA GCTGACTCAC TAGAGATGCA GCACATGCTA
AGAACTATCA ACACTTGGCA GCCAGATCTT TATATCGATG TACACGTAAC CGACGGCATC
GATTATCAAT ACGATGTCAC CTTCGGTTAT AACCTACCCC AAGGTTTGAG CCCCGCCAGT
TATAATTGGC TCGAAAAGAT CTATCGACCA GCAATAGAAG CCGATTTAAC ATCTCAAGGC
CATATTCCAG GCCCCCTAGT CTTTGCTATC GATAACACAG ATATCACTAA AGGAATGTCG
CTATGGAATG CCAGTCCGCG CTACTCTAAC GGTTATGGTG ATGCCCGCCA CCTGCCCACT
ATTTTAGTCG AGAACCACAG CTTAAAACCC TTTAAACAGA GAGTACTTGG CACCTATGTG
ATGCTAGAGT CCACCCTCAA GACTGTTGGA CAACAAGCCA CTAAACTCAA AGCGGCCATC
CGCAAAGATA AGTTTAGTTA CTCTCCTATG GTGACCTTAA GCTGGAAAGA GAAACAGCAA
GACAAAGGTT GGGACTTTAA GGGGATCGAT TACCACTTAG AGAAAAGTGA AATAAGCGGC
AATGAGGTCG TTCGCTGGAC AGGTGAACCT AAACTTTACC CAGATCTCCC TGTTATCGGT
AACACAGTCG CCGATGTCCG AGTAAAAAGA GCGAGCGCCT ATTATATCCC CGCTCAATGG
ACTGAGGTCA TAGCCCGCTT AGAGAACCAT GGTATTCGTC TAACTCGCAC CGAACAAGAA
ACAGAGATGG CACTGGAGCA GTATCAATTT ACTCAGCCTG AGTTTGCCAC TAAGGATTAT
GAAGGGCGTC AACGTGTCGA TGCGCAAGTC ACTAAGCACT CAATAAAGAC AACTCTTCCC
GCCGGTACAG TGAAGATAGA TACTAAACAG CCATTGGGGG ATCTGGCCAT CCTGCTACTG
GAGCCACAAT CACCAGACTC ACTGTTTCAA TGGGGGCTGT TTAACCCTAT TTTCACCCGC
ACTGAGTATA TTGAAAACTA CGCAGTAGAG CCTTTAGCGA GGCAGATGCT TGAAGAGAGC
CCCGCACTGC AGGCAGAGTT TGAGCTGGCA TTAGCCGATC CTCTATTCGC CACCAATCCA
AAAGCTAGGT TACGCTGGTT TTACGAGCGC AGCCCTTATT ACGATGACCA ATATATGAAG
TATCCAGTGT TAAGACAAAA ATAG
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| Protein sequence | MDMRLAPLSI ITLLTISASS TTSTFATAND TQTATDNTPK TATPQIANSY INDKILPPAI
EWHGKSEELL LGADAEWATP FEQHGLKTSP SYDETFIWLD KLIAQSDKLK KVSIGKSPQG
RDIWMIIASQ EGAATPETLA KNDKPSVLVQ AGIHSGEIDG KDAGMMLLRD IIIGDKGELL
NKTNLLFVPI FSVDGHERST QYNRVNQRGP LDMGWRTTAN NLNLNRDYAK ADSLEMQHML
RTINTWQPDL YIDVHVTDGI DYQYDVTFGY NLPQGLSPAS YNWLEKIYRP AIEADLTSQG
HIPGPLVFAI DNTDITKGMS LWNASPRYSN GYGDARHLPT ILVENHSLKP FKQRVLGTYV
MLESTLKTVG QQATKLKAAI RKDKFSYSPM VTLSWKEKQQ DKGWDFKGID YHLEKSEISG
NEVVRWTGEP KLYPDLPVIG NTVADVRVKR ASAYYIPAQW TEVIARLENH GIRLTRTEQE
TEMALEQYQF TQPEFATKDY EGRQRVDAQV TKHSIKTTLP AGTVKIDTKQ PLGDLAILLL
EPQSPDSLFQ WGLFNPIFTR TEYIENYAVE PLARQMLEES PALQAEFELA LADPLFATNP
KARLRWFYER SPYYDDQYMK YPVLRQK
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