Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_4327 |
Symbol | |
ID | 6118682 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 5240906 |
End bp | 5241805 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641635890 |
Product | enoyl-CoA hydratase |
Protein accession | YP_001762675 |
Protein GI | 170728649 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.164377 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTTATCTC TATTAGTTAA ATATGCCAAA TATGTTAATC TTGCTTCTGG ACTGACCAGT GTTAATAGGG AGAGTGTGAT GAGCCGGGAG TTTGTAAAAA TAGTCAGAGA GCAGGGAGTT GCGTACGTTA CCTTGACTCG CCCTGACAAA TATAATGCAA TTAATTATCA GATGTTTAAA GAGATAGACG GTGTTATCTC TGAGCTGAAA AAAGATCGTA CGGTTAAGTT AGTCATTTTA TCAGGCGCCG AGGGTAACTT CAGTTCGGGA CTTGATGTAA AAAGCGTAAT GAACTCCCCC TTACAAGCTG TTGGGTTACT CTTTAAGTGG TTACCAGGTA ATGCCAATCT TGCTCAAAGG GTCTCTTGTG GTTGGCGGGC GTTGCCAATA CCTGTGATTG CTGTTATTGA GGGCTGCTGC TTTGGTGGTG GGATGCAGAT TGCACTTGGT GCAGATATCA GGCTTGTGTC TCCCGAGGCT AAACTTTCGA TTATGGAAGC CAAATGGGGG CTGGTTCCTG ATATGGCGGG ATTAATATCA CTGAGGGAGT TAGTAGGTAA AGACAGAGCT ATGTTACTGA CCATGACGGC TAAGGTCCTG TCAGCGCAGG AATCCCTTGA AGTCGGCTTA GTGACAGAGG TTGCTCAATC GCCTATGGCA AGAGCCAAAG AGTTAGCCGA AGAGATTATT TGTACCTCTC CCGATGCCAA TGCCGCCATT AAGATGAGTA TTAACAAGAG CTGGACTGCC AGTGTCAGGC GGCTTTTGTC TCGGGAGTCA ATCAGTCAGA TTCGGCTGCT TATGGGGAAA AATAGAGTCA TTGCTGCTAA GCGAAACAGC CAAGATGCAA AGGGAGTTGA ACCTAAGTCT GAGTACCTAA TTCGCCAATC TGGCTGGTGA
|
Protein sequence | MLSLLVKYAK YVNLASGLTS VNRESVMSRE FVKIVREQGV AYVTLTRPDK YNAINYQMFK EIDGVISELK KDRTVKLVIL SGAEGNFSSG LDVKSVMNSP LQAVGLLFKW LPGNANLAQR VSCGWRALPI PVIAVIEGCC FGGGMQIALG ADIRLVSPEA KLSIMEAKWG LVPDMAGLIS LRELVGKDRA MLLTMTAKVL SAQESLEVGL VTEVAQSPMA RAKELAEEII CTSPDANAAI KMSINKSWTA SVRRLLSRES ISQIRLLMGK NRVIAAKRNS QDAKGVEPKS EYLIRQSGW
|
| |