Gene Swoo_4327 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_4327 
Symbol 
ID6118682 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp5240906 
End bp5241805 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content46% 
IMG OID641635890 
Productenoyl-CoA hydratase 
Protein accessionYP_001762675 
Protein GI170728649 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.164377 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTATCTC TATTAGTTAA ATATGCCAAA TATGTTAATC TTGCTTCTGG ACTGACCAGT 
GTTAATAGGG AGAGTGTGAT GAGCCGGGAG TTTGTAAAAA TAGTCAGAGA GCAGGGAGTT
GCGTACGTTA CCTTGACTCG CCCTGACAAA TATAATGCAA TTAATTATCA GATGTTTAAA
GAGATAGACG GTGTTATCTC TGAGCTGAAA AAAGATCGTA CGGTTAAGTT AGTCATTTTA
TCAGGCGCCG AGGGTAACTT CAGTTCGGGA CTTGATGTAA AAAGCGTAAT GAACTCCCCC
TTACAAGCTG TTGGGTTACT CTTTAAGTGG TTACCAGGTA ATGCCAATCT TGCTCAAAGG
GTCTCTTGTG GTTGGCGGGC GTTGCCAATA CCTGTGATTG CTGTTATTGA GGGCTGCTGC
TTTGGTGGTG GGATGCAGAT TGCACTTGGT GCAGATATCA GGCTTGTGTC TCCCGAGGCT
AAACTTTCGA TTATGGAAGC CAAATGGGGG CTGGTTCCTG ATATGGCGGG ATTAATATCA
CTGAGGGAGT TAGTAGGTAA AGACAGAGCT ATGTTACTGA CCATGACGGC TAAGGTCCTG
TCAGCGCAGG AATCCCTTGA AGTCGGCTTA GTGACAGAGG TTGCTCAATC GCCTATGGCA
AGAGCCAAAG AGTTAGCCGA AGAGATTATT TGTACCTCTC CCGATGCCAA TGCCGCCATT
AAGATGAGTA TTAACAAGAG CTGGACTGCC AGTGTCAGGC GGCTTTTGTC TCGGGAGTCA
ATCAGTCAGA TTCGGCTGCT TATGGGGAAA AATAGAGTCA TTGCTGCTAA GCGAAACAGC
CAAGATGCAA AGGGAGTTGA ACCTAAGTCT GAGTACCTAA TTCGCCAATC TGGCTGGTGA
 
Protein sequence
MLSLLVKYAK YVNLASGLTS VNRESVMSRE FVKIVREQGV AYVTLTRPDK YNAINYQMFK 
EIDGVISELK KDRTVKLVIL SGAEGNFSSG LDVKSVMNSP LQAVGLLFKW LPGNANLAQR
VSCGWRALPI PVIAVIEGCC FGGGMQIALG ADIRLVSPEA KLSIMEAKWG LVPDMAGLIS
LRELVGKDRA MLLTMTAKVL SAQESLEVGL VTEVAQSPMA RAKELAEEII CTSPDANAAI
KMSINKSWTA SVRRLLSRES ISQIRLLMGK NRVIAAKRNS QDAKGVEPKS EYLIRQSGW