| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4085 |
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| Symbol | |
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| ID | 6118435 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 4956645 |
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| End bp | 4957682 |
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| Gene Length | 1038 bp |
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| Protein Length | 345 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641635646 |
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| Product | transport system permease protein |
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| Protein accession | YP_001762436 |
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| Protein GI | 170728410 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0609] ABC-type Fe3+-siderophore transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.569301 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGTGG CAGTTAAGTC TGGCCTACAT CAGGTTTGGG TCAACCTCTC GCTCTTGATT
ATCTCGCTTG TCTCCTTAGT GGCTGCTGCG AGTTTTGGCG CTGCGGATCT CTCCTTTGTC
GACGTGTTGA GTGTACTAGA ACATAAAGCT TTTGGTTCGG GAGTCTCAGA GGGAGCTGGC
ATTGCCGAGC GGATCATTAT CGAACTCAGG TTTCCGCGGA TTTTACTGGC TTTTACCGCG
GGAGCGGGAC TCTCTATTGC TGGTAGTGTG TTACAAACCG TGACCCGTAA CCCGTTAGCG
GACCCCTATC TGTTTGGGAT CTCCTCGGGT GCTTCCTTTG GTGCAGTGGT GGTGCTGACG
CTGTTCTCTA GCTCAGGGCT GTTCGAGCGT TACGAGTGGT TAAGTTTGCC ATTAGGGGCA
TTTATCGGTG CTGGTTTGTC GGTATTGATG GTGCTGAGTC TGTGTGGCCG CACCATGAGT
AGTCAGATTG AGCGCATGCT GCTTTCTGGC GTAGCTATCT CCTTTATGTT CGGGGCGCTC
ACTAGCCTTC TGCTCTATTT CTCCAGCCCC CAGGCCGCAG CATCTGTGCT TTTTTGGAGT
CTGGGCAGTT TTGCAAAAGC GGGTTGGGAT ACCCTATTGC TTCCCTTTGC TGTCGTGAGC
TTTTCTACTG TAATCATACT GTTATTTAAG CGCCAGATAA TGGCCATGAG AGCTGGAGAT
GAAACCGCCC ACACATTAGG TGTTAACGTC GCTCGTTTGC GCTTGCAGAT GCTATTACTG
TGCTCGTTCA TCACCGCTAT CTTAGTGGCC AACTGTGGAG GAATTGGCTT TGTGGGTTTG
ATGATCCCAC ACACGGTCAG AATGCTATTT CCTGGCTACT TTCCTCTGCT GACGACGGCG
CTGTTTGGTG GCTTGTTTAT GATCTGGATC GATGTGTTGG CTCGGACACT ATTGAGTCAC
CAAGAGCTGC CTATCGGCAT TATTACGGCT GTGATCGGCA GTGTTTTCTT TCTGGCTATT
TTAGGGCGAA AAAAATAG
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| Protein sequence | MTVAVKSGLH QVWVNLSLLI ISLVSLVAAA SFGAADLSFV DVLSVLEHKA FGSGVSEGAG
IAERIIIELR FPRILLAFTA GAGLSIAGSV LQTVTRNPLA DPYLFGISSG ASFGAVVVLT
LFSSSGLFER YEWLSLPLGA FIGAGLSVLM VLSLCGRTMS SQIERMLLSG VAISFMFGAL
TSLLLYFSSP QAAASVLFWS LGSFAKAGWD TLLLPFAVVS FSTVIILLFK RQIMAMRAGD
ETAHTLGVNV ARLRLQMLLL CSFITAILVA NCGGIGFVGL MIPHTVRMLF PGYFPLLTTA
LFGGLFMIWI DVLARTLLSH QELPIGIITA VIGSVFFLAI LGRKK
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