| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3956 |
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| Symbol | |
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| ID | 6118305 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 4820593 |
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| End bp | 4822293 |
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| Gene Length | 1701 bp |
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| Protein Length | 566 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641635517 |
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| Product | putative monovalent cation/H+ antiporter subunit D |
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| Protein accession | YP_001762308 |
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| Protein GI | 170728282 |
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| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0651] Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGGATGC TTGAGCTACC GCCCTTTGTA CTGTTTTTAA TTGGCGGACT AATTGCTGCA
ACAACACGCG GGAAGCTGCG TGGTGCATTG ATGATTGCCA TTCCAGTTAT CAGTGGATTA
CATCTGTGGA CCGTACCTGA AGGCGTCCAC TTACAGTTGA TGTTTTTAGA CTATCAACTG
GTCCCCTACC GCGCCGACAA ATTAAGCCTG ATGTTTGGCT ATATTTTCCA TATTGCCGCC
TTTATTGCCA TCATCTATTC ACTGCACGTT AAAGACACAG TTCAGCAGGT AGCGGCCATG
CTCTATGCGG GCAGCGCCAT AGGTGCGGTG TTTGCGGGTG ATCTGCTTAC CCTGTTTGTA
TTCTGGGAAC TATTGGCCTT TACCTCAGTA TTTCTAATTT GGGCTCGCCG TACCCCTCAA
GCCTACAGCG CAGGTATGAG ATATTTGATC ATGCAGGTGC TCTCAGGGGT AATTCTGCTA
GTTGGAGCCC TGTTTTATAT TGCAGACACT GGCAGTATCT CCTTCGACTT TATCGGCCTA
GAGGGTATTG CTGGCTGGCT TATCTTTATC GCCTTTGGCA TTAAGTGCGC CTTTCCTTTT
GCCCACACTT GGCTTACCGA TGCCTACCCT GAAGCGACAC CGACCGGTAC CGTATTACTC
AGTGCATTTA CCACTAAGGT GGCGGTTTAT GCTCTGGCTC GCGGCTACCC CGGCACGGAA
CTGCTGGTTT ATATTGGCGC GGCTATGACC TGCTTCCCCA TCTTCTTTGC GGTGATAGAA
AACGATCTTC GTCGAGTACT GGCTTATAGC TTGATTAACC AAGTTGGCTT TATGGTGGTT
GGGATCGGTA TTGGTACAGC CTTAGCACTT AATGGTGCGG TATCTCACGC CTTTAATGAT
GTGATCTTTA AAGGCTTACT GTTTATGAGC ATGGGTGCAG TGCTGCATAT GACAGGTCGA
ATAAATGGCT CAGATCTCGG CGGCCTCTAT AAGACCATGC CCAAAACCAC GATACTGTGT
ATTGTCGGCG CAGCCTCTAT CTCGGCATTC CCACTATTTA GCGGCTTTGT CAGTAAATCT
ATGGTGATGA CTGCCGCCAT TGAAACTGGT CATGACTGGG TTTGGTTAAT GCTGCTATTT
GCCTCTGCAG GGGTATTCCA CCATGCAGGT ATCAAGATCC CCTACTTTGC ATTTTTCGCC
CATGATTCAG GGATTAGAGC CAACGATCCG CCAAACAACA TGGTATTGGC CATGTTCATT
GCAGCTTGTT TGTGTATCGG CATTGGTATC TACCCTGCGG CGCTCTACTC ACTGCTGCCA
TACGATACTG GTTACAACCC CTATGATGCG ACCCATGTGC TCGCACAGAC CCAGTTACTG
CTGTTCTCGG CACTGGCCTT CGTCTGGTTG AACCTAAAAG GTATGTACCC GCCAGAGCTG
CGCTCGACTC ATCTGGATGT GGATTGGGTC TACAGACGCC TAGTCCCTAA TGCCCTGCAG
CGGATGTTTG CGGTGGTCTG GAAAGTGGAT GGAGAAGTGC GTCAAGCAGT CCTTGGTAAG
CTTAACCAAG GTCAGCAACT GTTAACACGC AAGAGCAAAG GAGCGGGAAG CTTTATCTCC
AGTACCTACC CCTCTGGCAA TATGGTGCTT TGGGTTGCCA TCATTCTAGC TGCCTACCTG
TTTATGGTCT TTATTGGCTA A
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| Protein sequence | MWMLELPPFV LFLIGGLIAA TTRGKLRGAL MIAIPVISGL HLWTVPEGVH LQLMFLDYQL
VPYRADKLSL MFGYIFHIAA FIAIIYSLHV KDTVQQVAAM LYAGSAIGAV FAGDLLTLFV
FWELLAFTSV FLIWARRTPQ AYSAGMRYLI MQVLSGVILL VGALFYIADT GSISFDFIGL
EGIAGWLIFI AFGIKCAFPF AHTWLTDAYP EATPTGTVLL SAFTTKVAVY ALARGYPGTE
LLVYIGAAMT CFPIFFAVIE NDLRRVLAYS LINQVGFMVV GIGIGTALAL NGAVSHAFND
VIFKGLLFMS MGAVLHMTGR INGSDLGGLY KTMPKTTILC IVGAASISAF PLFSGFVSKS
MVMTAAIETG HDWVWLMLLF ASAGVFHHAG IKIPYFAFFA HDSGIRANDP PNNMVLAMFI
AACLCIGIGI YPAALYSLLP YDTGYNPYDA THVLAQTQLL LFSALAFVWL NLKGMYPPEL
RSTHLDVDWV YRRLVPNALQ RMFAVVWKVD GEVRQAVLGK LNQGQQLLTR KSKGAGSFIS
STYPSGNMVL WVAIILAAYL FMVFIG
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