| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3925 |
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| Symbol | |
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| ID | 6118274 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 4783011 |
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| End bp | 4784699 |
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| Gene Length | 1689 bp |
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| Protein Length | 562 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641635487 |
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| Product | respiratory-chain NADH dehydrogenase domain-containing protein |
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| Protein accession | YP_001762278 |
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| Protein GI | 170728252 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1894] NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit
[COG1905] NADH:ubiquinone oxidoreductase 24 kD subunit |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGAGA TACGGGACGC TGGAATTTGG AAGTCAGCAA AGGGCAAAGG GCGTGCAACA
CCTAAGGGAC GCCAACTTTC AGAGGGGGCG TTCAATGAAG TTCAACAACT TATAAAAGAT
ATGCCGCTCA GGCGTGATCT ACTGATTGAA TACCTTCACA GAGTTCAGGA CACATTTGGT
CACCTTAGCG CTCCACACAT TAAAGCCCTT GCAGATCACC TTAATATTGG CGAGGCTGAG
GTCTATGAAG TTGCCAGTTT CTACGCCCAC TTCGATCTAA TAAAAGAGGG ACAAACACCT
CCCCCCGCAA CGACGCTTCG CGTGTGTAAC AGCCTCTCCT GTACAATGGC CGGAGCTGAT
GAGTTAGCCG ATGAGTTAAA TAAGACCCTA GACAACCAAG AGGTTCGCGT ATTGCGCGCT
CCCTGTATGG GCCGCTGCAA TACCGCGCCC ACCGTAGCCC TTGGCCGTAA CCATATCGAT
CACGCCACAC CCGCTAAACT TCAACAAGCG ATATCGTCAA ACGCCTTTAC TGCCCCAATC
CCTTGCTATC AATCCCTGAC TGATTACCTC GCAGGGGGCG GATATCAGTT CTACGAGCAG
ATGAAAGCCA GTACTTTAGA CCCCATTGAG GTCGAGGATA AGGTGTTCTC AGCTGGCCTC
AGGGGCATGG GCGGTGCAGG ATTCCCCTCG GGGAAAAAGT GGAGTTTTGT GCGCGCCGAA
TCAGGCCCAA GATACATGGC CGTTAACGGT GATGAGGGGG AACCCGGTAC TTTTAAAGAT
AGGTATTATC TGGAAACTCA GCCTCACCTT TTTATGGAGG GGATGCTGAT CGCCGCACAA
GCCGTTGAAG CTGAGCATAT CTACCTCTAT CTTCGTGATG AGTACCCAGC AGCGCTTACC
ATACTCAAAC GTGAAATAGC CGAACTGGAA TCAGCCAATA TCGTCCCTAT TGGCTATATC
GAACTTCGCC GAGGTGCAGG TGCCTATATC TGCGGTGAAG AGAGTGCCAT GATTGAGTCC
ATCGAAGGCA AACGCGGACT GCCGCGACAT CGTCCACCGT TTGTGGCTCA AAAGGGAATT
TTTAACCAGC CCACCTTAGT TCATAATATA GAGACTCTCT ACTGGGTCGC ACGGATCTGC
CGCGAAGGTG GCGAGATACT GACCTCTGTC AGCAAAAATG GCCGCACAGG ACTGCGCAGT
TATTCGGTGT CAGGCAGAGT CATTAATCCC GGCGTCTATC TTCTACCTGC AGGCTCGACC
ATTACCGATC TCATTGAGGC AGCTGGCGGC ATGATCCAAG GTCATCGGCT GAAAGCTTAT
CAACCTGGTG GCCCCTCCTC CGGCATTTTG CCCGCCAGTT TAGCCGATGT GCCACTGGAC
TTTGATACCC TACAACCCCA TGGTTCACTC ATAGGCTCTG CCGCAGTTTT GGTATTATCG
GATAAAGACA GCATCCGCGA CGCCGCCCTT AATATGATGG AGTTTTTCGA TCATGAAAAT
TGTGGTCAAT GTACGCCTTG TCGCGTTGGC TGTGAAAAAG CGGTCAAGTT AATGCGTGAA
GATAAATGGG ATACCAGCTT ATTGTCAGAG CTTAGCAGTG TCATGGAGGA CGCCTCTATT
TGCGGCTTAG GCCAAGCAGC ACCAAACCCC ATTCGTCTTA CCATCAAACA TTTTCCCGAT
GAGGTGTAA
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| Protein sequence | MTEIRDAGIW KSAKGKGRAT PKGRQLSEGA FNEVQQLIKD MPLRRDLLIE YLHRVQDTFG
HLSAPHIKAL ADHLNIGEAE VYEVASFYAH FDLIKEGQTP PPATTLRVCN SLSCTMAGAD
ELADELNKTL DNQEVRVLRA PCMGRCNTAP TVALGRNHID HATPAKLQQA ISSNAFTAPI
PCYQSLTDYL AGGGYQFYEQ MKASTLDPIE VEDKVFSAGL RGMGGAGFPS GKKWSFVRAE
SGPRYMAVNG DEGEPGTFKD RYYLETQPHL FMEGMLIAAQ AVEAEHIYLY LRDEYPAALT
ILKREIAELE SANIVPIGYI ELRRGAGAYI CGEESAMIES IEGKRGLPRH RPPFVAQKGI
FNQPTLVHNI ETLYWVARIC REGGEILTSV SKNGRTGLRS YSVSGRVINP GVYLLPAGST
ITDLIEAAGG MIQGHRLKAY QPGGPSSGIL PASLADVPLD FDTLQPHGSL IGSAAVLVLS
DKDSIRDAAL NMMEFFDHEN CGQCTPCRVG CEKAVKLMRE DKWDTSLLSE LSSVMEDASI
CGLGQAAPNP IRLTIKHFPD EV
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