| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3912 |
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| Symbol | |
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| ID | 6118261 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 4768025 |
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| End bp | 4769785 |
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| Gene Length | 1761 bp |
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| Protein Length | 586 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641635474 |
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| Product | flavocytochrome c |
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| Protein accession | YP_001762265 |
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| Protein GI | 170728239 |
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| COG category | [C] Energy production and conversion
[S] Function unknown |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit
[COG3976] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01813] flavocytochrome c |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATTTCA AATTTAAAAA GTCAGTTCTA GGTATGGCTG TTGCTGTCCC AGTTGTTCTA
GTTGGTTGTG CAGTCACAAA CGAAATGGTT AAATCACAAG GTACTGCTAA AGGTAGGCAT
GGTGATATCA CAGTAGAAAC CACGTTTGAG AATGGCAAAA TCACAGCCAT TGATATTGTG
AAGCAGAAAG AGAATAGAGT GTTATCGGCT GCTGTTTACA AAGACGTTAA ACAGGCAATT
ATCGATAATA ATAGTATAAA TGTTGATGGT ATTACTGGTG CAACAGCAAC ATCAGATGGT
CTAAAAAAAG CGGTCGCTAA ATCTGCTGAG CTTGCTGGTA TCACTCTTGT GGCGACGGCG
GCTATTAATG GCAAAAAAGT CAATGCTGAG CCATCAGAGT ACACTTATGA CGTGGTTGTT
ATCGGTGCCG GTGGAGCAGG TTTCTCCGCT GGTGTTGAGG CAGTTGAAGC TGGCGTGTCT
GCTGTTATTA TTGAGAAACA GCCAATTATT GGTGGTAACT CGTTGATCTC TGGCGGCGAA
ATGAACGTAG CTGGTAGTTG GGTTCAACAA AGCATGGGGA TCACTGACAG CAAAGCGCTT
TTTATCGAAG ACACACTAAA GGGTGGCGAT TACAAAGGCG ACCCTGAGAT GGTACGCGTA
ATGGCCGACA ATGCTGTTGC CGCGGCTGAA TGGTTACGTG ATGACATCAA GGTCGACTTC
TACAAAGACC AGATCTTTCA GTTTGGCGGT CACTCAGTTA AACGTGCTGT TATCCCTAAA
GGACACACAG GTGCAGAAGT ACTAAGTAAG TTTGCCGCTA AAGCAGAAGA GATTGGCCTA
CCAGTTCACA TGAACACAAC GGCAAAGAAC CTTATCCAAG ACGAGACAGG TCGTGTTGTC
GGCGTTAAGG CGATGAAGAA TGGTAAGGTG ATCACTTATC ACGCTAAGAA AGCCGTTGTC
ATGGCCGCTG GTGGCTTTGG TGCTAACATC GAAATGCGTA AAAGGTTTAA CCCTGAATAC
GATGAGCGTT ATGGCACGAC TAATCACGCA GGTGCGACTG GTGATGGTAT CGTGATGTCT
GCTGCGATTA ACGCTAAGAC AGCAAATCTA GGTGAGATCC AAGCATACCC AATCTGTAAC
CCTGAAACAG GTGCTATTGC GTTAATCGCC GATGCCCGTT TTTTCGGTGC TATCTTGGTC
AACCAAGAGG GTAAGCGTTT TGTTGAGGAG CTTGATCGCC GTGACGTCAT CTCTAACGCC
ATTTTGAACC AAACAGGTAA GTATACTTAT GTTATTTGGA ATCAAAAGAT TGATGATCTC
GCTAAGACTA TCGACATGCA CCCAGGTGAG TTCAACGATC TACACTCTCG TGGATTAATG
TTTGAAGTTG AAAGCATTGA AGAGGCTGCT GCGAAATTCA ATATTCCTTT AGATACTCTG
CAAAACACCA TCAAGGATGT AAACCAATAT GCGGCAACGG GTAAGGATTT AGCATTTAAT
AACCGTGCGG GACTTGTTGA TATGTCAGAA GGTAAGTATT GGATCTTAAA AGCAACGCCA
TCTGTGCATC ACACCATGGG CGGTATCGCG ACCACCACGA AAGCGGAAGT ATTAAATAAT
GATGGTGACA TCATTAAAGG CTTGTATGCT GCTGGTGAAG TGACAGGCCT AACTCATGGT
TCTAACCGTT TAGGTGGCAA CGCTTATACC GATATTATTG TGTTTGGTCG TATTGCAGGC
CAAGAAGCGG CTAAGCAATA A
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| Protein sequence | MNFKFKKSVL GMAVAVPVVL VGCAVTNEMV KSQGTAKGRH GDITVETTFE NGKITAIDIV
KQKENRVLSA AVYKDVKQAI IDNNSINVDG ITGATATSDG LKKAVAKSAE LAGITLVATA
AINGKKVNAE PSEYTYDVVV IGAGGAGFSA GVEAVEAGVS AVIIEKQPII GGNSLISGGE
MNVAGSWVQQ SMGITDSKAL FIEDTLKGGD YKGDPEMVRV MADNAVAAAE WLRDDIKVDF
YKDQIFQFGG HSVKRAVIPK GHTGAEVLSK FAAKAEEIGL PVHMNTTAKN LIQDETGRVV
GVKAMKNGKV ITYHAKKAVV MAAGGFGANI EMRKRFNPEY DERYGTTNHA GATGDGIVMS
AAINAKTANL GEIQAYPICN PETGAIALIA DARFFGAILV NQEGKRFVEE LDRRDVISNA
ILNQTGKYTY VIWNQKIDDL AKTIDMHPGE FNDLHSRGLM FEVESIEEAA AKFNIPLDTL
QNTIKDVNQY AATGKDLAFN NRAGLVDMSE GKYWILKATP SVHHTMGGIA TTTKAEVLNN
DGDIIKGLYA AGEVTGLTHG SNRLGGNAYT DIIVFGRIAG QEAAKQ
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