Gene Swoo_3911 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_3911 
Symbol 
ID6118260 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp4766681 
End bp4767871 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content41% 
IMG OID641635473 
Producthypothetical protein 
Protein accessionYP_001762264 
Protein GI170728238 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.344903 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATATGA TCCGTGCTCC TAATCCAATG TCGGGTTATG AACATGAGAA TAAAAAAGTG 
AAAAAGCTAA AGTTATCTAT TTTAATTAGT GCGTTACTTG GTGCTTCAAC AGCTGTAATG
GCTGATGAGT TCGAACCTTC TGTTGATTTG GGTGGTGCTG TTAAGGTTAA GTACTTCGTT
GATGATGGCA ATGAAGCGTC TAAATCAAAT GGTGGTACAT TCGCATTTGA CGCATTAGAA
CTCGATATCG ATAGCCATAT TAGTGAAAAC TGGACCGCAA GCGCTAAGTA CGTTTTCAAA
AACTCTTCAA GCAACCATTT CATTAAGTAC GCTTTTGCTG CGTACAATGG TGTTGAAGAT
TGGCAGTTCC AGGGTGGTGT TATCAGCAAG CCATTTGGTA ATAAGAGCTT CATCTCACAC
AACTGGTGGG AGAGTATCAA CTACTACATG GGCTTTGAGG ATGACTATGA TCTAGGTGCT
AAAGCTATCT ATAGCAGTGG CAACTGGACC TCTGAAGTAG CATTTTTCAA GAACAGTGAA
TACTCATCAT CTGATACCCG CGGTTATGCT GCAGATGCCT TCACAGGTTC TATTGGCGAT
AACACCTATG ACAATGAAGA AACCAATACA TTCAACATCC GCCAGTCTTA TGTTTTTGAC
TATGACAAGC TAACAGTTCA AGTTGGTGCA TCGTTAGAGT ACGGCCAGCT ATATAATGCC
GCCCATGACG ACCATGGAAC ATCGACAGCT TATGCTGTTC ATTTAGATGC TCAGTACAGC
GGTTACCAGT TACAGCTACA GATGGTTGAT TATGATTATG ACCAGTATGA TAGTGAAAAC
AGCAATGGTC TATATGCAAT GAAGATGGGT GGTGGCGCTT ATGAAGTGGC TGCTAAAGGT
CAAATCTTTG CTGCTAATAT CGCCAAATCT ATCGGTTATG ATTGGGGTAC AGTTACCCTG
TATAATGACT ATAGCCACTT GACACCAGAT ACCGATATTA ACGCTAATCT AAATGATTCT
GTGATCAATA CAACTGGTGT GAGTATTGGG GTATCTGACT TCTTTATTTT TGTTGATCAT
ATCTACGGCA AGAACGCTGT ATGGTTAGGT GGTCAACAAG GTCTTGGTAT CGAAAACCAA
GATGATAATT TCTACTCTCT ATTCAATATC AGCGTAGCTT ACTATTTCTA A
 
Protein sequence
MDMIRAPNPM SGYEHENKKV KKLKLSILIS ALLGASTAVM ADEFEPSVDL GGAVKVKYFV 
DDGNEASKSN GGTFAFDALE LDIDSHISEN WTASAKYVFK NSSSNHFIKY AFAAYNGVED
WQFQGGVISK PFGNKSFISH NWWESINYYM GFEDDYDLGA KAIYSSGNWT SEVAFFKNSE
YSSSDTRGYA ADAFTGSIGD NTYDNEETNT FNIRQSYVFD YDKLTVQVGA SLEYGQLYNA
AHDDHGTSTA YAVHLDAQYS GYQLQLQMVD YDYDQYDSEN SNGLYAMKMG GGAYEVAAKG
QIFAANIAKS IGYDWGTVTL YNDYSHLTPD TDINANLNDS VINTTGVSIG VSDFFIFVDH
IYGKNAVWLG GQQGLGIENQ DDNFYSLFNI SVAYYF