Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_3908 |
Symbol | |
ID | 6118257 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 4762875 |
End bp | 4763633 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641635470 |
Product | hypothetical protein |
Protein accession | YP_001762261 |
Protein GI | 170728235 |
COG category | [R] General function prediction only |
COG ID | [COG0730] Predicted permeases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000000656929 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.36574 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATATCA CCTTAACCCA TGCGGTTTTG CTACTTGTTA CCGGCTTTTT TGCTGGGATC ATTAATACCT TGGCGGGTGG TGGCTCAAAC CTGACCTTGC CTGCTCTCAT GGTGATGGGG ATGCCTGCTG AGGTGGCTAA TGCCACCAAT CGAGTTGGCG TTTTAATGCA GTCTATTGTT GCGGTATTGG GGTTTAAAAA GCATGGCAAG CTAGACACGG ATGATACCGT GCCTATCCTG ATCCCCACTA TTGTTGGTGG TCTCTTAGGG GCTGCTGGGG CCGCCTATGC CCCCAGTGAA TGGATAAAAC CTCTGCTGCT GGGCACTATG TTATTGATGG CATTTATTAT TCTAGTTAAA CCCTCCATGG TGGCACCTGA GTTAGGCACT CCTGTTAAAC AGGTATCGCA AACCCCTGCT TCATGGTGGT GGTTGGGCGT AGCTGGTTTT TACGGTGGAT TTGTACAAGC GGGCGTCGGC TTTGTTTTAC TGGCTGCTCT AGCAGGCTCT TTACGATATG ACCTTGTACG AGCTAACGCA CTTAAGATGC TCTGTACCTT AGTTTTCACC TCAGTTGCAC TGGTGCTATT TATCATCGAG GGGCTAATTC AGTGGTTACC TGGATTGATA CTCGCGCTCA GCACCATGTT TGGCGCTCAC CTTGCGGTGA AACTTGCGAT TAAGGCCAAA CCAGATACCT TAAAGTGGTT CCTGTTTATT ATGACCTTGG TAGGTTGTAT CGCTGCCATG TTTAGTTAG
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Protein sequence | MDITLTHAVL LLVTGFFAGI INTLAGGGSN LTLPALMVMG MPAEVANATN RVGVLMQSIV AVLGFKKHGK LDTDDTVPIL IPTIVGGLLG AAGAAYAPSE WIKPLLLGTM LLMAFIILVK PSMVAPELGT PVKQVSQTPA SWWWLGVAGF YGGFVQAGVG FVLLAALAGS LRYDLVRANA LKMLCTLVFT SVALVLFIIE GLIQWLPGLI LALSTMFGAH LAVKLAIKAK PDTLKWFLFI MTLVGCIAAM FS
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