| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3891 |
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| Symbol | |
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| ID | 6118240 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 4743443 |
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| End bp | 4746682 |
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| Gene Length | 3240 bp |
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| Protein Length | 1079 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641635453 |
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| Product | peptidase S41 |
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| Protein accession | YP_001762244 |
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| Protein GI | 170728218 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4946] Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0939708 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00000524124 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAAACAA AACTCACCTT AGCTGCATTG TGTATTCTGG CTAGCAGCGT TCAAGCAGAA
ACCTTACTCC TACAAGAACC CAGTATCGCC CAAAATAAGA TAGCCTTTGT TTATGCAGGC
GACATCTATG TGTCAAACAA GCAGGGACAG CAGGTCACAC GCATCACCTC CCATGCCGCC
AACGAATACG CCCCTCATCT GTCACCTGAT GGCCAATGGA TCGCCTTTAC TGCCGATTAT
GAAGGCAATA ATGACGTCTA CATAGTGCCA GCGACTGGCG GTCAGCCTAA GCGGCTCACC
TGGCACCCAG GCACAGATGA AGTCAGAGGC TGGTCACCTG ATGGCAAGAG CGTGCTGTTT
ACCTCACGCC GAGATATTGC ACACAATCGT ACCGGACAGC TATTTAGTGT GGCAATACAG
GGCGGCTTCC CTACAAAAGT GATGGAAGCA GTGGTCTCTG ATGGCAAAAT GAATGCCGAT
GGCTCTAAGC TAGCCTACAA CCCAGAGCGT TTAGCCCATG GTGGTAAGAA TGGTTGGCGT
AATCACCGAG GTGGTACAAC ACCACCGGTG TGGATCTATG ACCTTAATAA GAACAGCTAT
GTAGAGGTTC CCCATGGCAA CTTCTCTGAT AGTTCACCTA TGTGGGTAGG CGAAGATATT
TACTTCATCT CAGATCGCAG CAAACATAAA AATATCTACA GCTTTAAACA GGGTCAGGTC
GAGCAAGTAA CCCACTTCAA CCAATGGGAT GTTGCCAATG CCAACGCATT TGGCAGCGAC
ATTGTTTTTG AAAAAGGTGG CGCGATATTT CTACTCGATA CATTAACAGG TAACAGCAAG
CAACTTAATA TCGATATAAA AGTGGACTTG CCTCAGCGCC GTACCCAGTT CAAAGATGCG
ATGCCCTCGC TCTCCAGTAG CCAGATCTCA GCAACGGGCA AACAGGTGCT GTTAAGTGCA
CGAGGCGAAG TCTTTAGCGT TCCGGTGAAA GATGGCAGTA CCTACAACCT CACCAACACA
TCGGGTCAAA ATGAGCGCGA TGCTCTGTGG TCACCACTGG GTGAACAGAT AGCCTATATC
ACTGATAAAG GTGGCGATTA CCGCTTGGTG TTGGCGGATC AATTTGGAGA GGTACAGAAA
ACTTTAGATT TAGGCAAACA TACCGCCGAT TTCTATCTAT TTAGCTGGAT GCCAGACGGT
AAACATATCG TCTTTGGTGA CTCCAATATG GCTCTATGGT TAATCGAACT CAAGTCAGGC
AAGAAAACCA AGGTCATGAA GAATATCGCC ATGACCTCCT ATGATGTCGT GAGCTCCCCA
GACAGCAAAT GGTTAGCCTA TACCCGCAAT AACACTAACT ATCTGCGCGA TCTGTATCTC
TACAATATTA AAGATAAGTC TCACCATAAA ATCACTGATG GCATGAGTGA CAACGCAGAG
CCAGTATTTA GCCCAGATGG TCAATACCTC TACTTTGCCT CCTCAACCAA CAAGGGATTA
ACGGCATTTG GATTAGACCT ATCAAGCCAA GAGCGCCCAC AGCGCTATGG GTTATATGCC
GCAGTATTGC AGCAAGATGG TCAATCTCCC CTTATGCCTA AGCTGGCCGA TGAGGCCTAT
CGCAGCGTTA ATGGCAGCCA AGATAAAGAT GAGGAGGAAG CGGATGACTC ACTACCAAGC
ATAGATATCA AAGGCCTCTC AAAACGAATT GTCGCTCTGC CAGTCCCGCA GCGTAATTAC
TGGGGATTAA CGGCTACTGA CGACAATAAC CTCTACTTCA TTGAGGGAGT ACAGATTGGC
TCAAGTATCG AACTTGATGG TAAGCCACTA CGCAGCTCAC AGCTAAAGCG TTTCAATTTT
GAGGAGCGCA AAGTCGACAA GGTTGCCGAG AAGATTGAGT CAGTCACAGT CTCAGCAGAT
GGTAAACAGC TATTGCTGGT CGGTGAAGGG AATGCACTCT CTACCGCCAC AGTTGCAGAG
AAGGTGGAAG TCACCCCACT CAATACCGCA GATGTTAAAG CGCGTATTAA TCCAACCCAA
GAGTGGGCAC AGATCTTCGA TGAAGCATGG CGCAATGAGC GTGATTACTT CTACGACCCT
AAGATGCACG GGCTTGATTG GCAGGGAGTG TACGACAAAT ACCAACCACT GTTTAAGCAT
GTTGGTCGCC GTGAAGATCT CAATAACTTA ATGCGTGAGA TGATCTCTGA GATGCAGGTT
GGCCATAACT ACATTATCGG CGGTGATGTT CACCGTGAAG AGACCATGAA AGTCGGACTA
TTGGGCGCTG ATTTTGAGGT CAAAAACGGC CTGTACCGCA TCAAAAACAT CTACACAGGA
GAAGCGTGGA ACCCACATCT TAAAGCGCCA TTAGCAGTGC CTGGTAATAA GGTCAGCGTT
GGCGACTACA TTCTTGAGGT GGATGGACAG CCCCTTGATG CTTCAATCAA CCTCTACTCA
CTGTTTGTAG GCAAGGTAGA TAAACAGGTA CGCCTAACTG TGAGCCCAAA TGGCAAAGCC
AAAAAAGCCC ATACTCTTGT GGTAGAGCCG ATTAAATCAG AGTTTGATCT GCGCCATTGG
CACTGGATTG AAGACAACCG CAACTATGTC ACCAAAGCAA CAGGTGGTAA GGTGGGCTAT
GTCTACCTGC CCAATACCAC CACCGCAGGT TACACCTCAT TTAACCGCAT GTTCTTCGCA
CAAGTTGATC GCAAAGGAGT CATTTTAGAT GAGCGTAGTA ACGGTGGCGG TCAAGCGGCT
AACTATATTA TCGATGTATT AAATCGTCAG TACTTGTCAG GTTGGAAGTA CCGCTCAGGT
GACATGGTTT ATGACACACC AGCAGGCGCA ATTTATGGCC CTAAAGTAAT GCTGATTGAC
CAAGATGCGG GCTCTGGAGG AGACTTCTTA CCTTATGCGT TTAAACGATT AGAGCTAGGC
ACCTTAGTGG GTAAAACCAC TTGGGGCGGC CTGATTGGGA TCTCGGCTAA CCGCGACTTT
ATCGATGGCG GCCGCGTAAC AGTGCCCAAC TTCCGCTTCT TCACCCCAGA TCATGAGTGG
CGTGTTGAAA ACGAAGGTGT CGCACCTGAT ATCGAAGTGG AACTAGATCC TGTCGCCGTC
AATAAGGGGC AAGATCCACA ACTAGATCGC GCCATTAAAG AGGTTCAGCA ACAGCTGAAA
AGCTTTAAAC CTGTGCGCCA CGATACGCCA CCGGCGTTCC CAACAGAGTT AGGACGCTAA
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| Protein sequence | MKTKLTLAAL CILASSVQAE TLLLQEPSIA QNKIAFVYAG DIYVSNKQGQ QVTRITSHAA
NEYAPHLSPD GQWIAFTADY EGNNDVYIVP ATGGQPKRLT WHPGTDEVRG WSPDGKSVLF
TSRRDIAHNR TGQLFSVAIQ GGFPTKVMEA VVSDGKMNAD GSKLAYNPER LAHGGKNGWR
NHRGGTTPPV WIYDLNKNSY VEVPHGNFSD SSPMWVGEDI YFISDRSKHK NIYSFKQGQV
EQVTHFNQWD VANANAFGSD IVFEKGGAIF LLDTLTGNSK QLNIDIKVDL PQRRTQFKDA
MPSLSSSQIS ATGKQVLLSA RGEVFSVPVK DGSTYNLTNT SGQNERDALW SPLGEQIAYI
TDKGGDYRLV LADQFGEVQK TLDLGKHTAD FYLFSWMPDG KHIVFGDSNM ALWLIELKSG
KKTKVMKNIA MTSYDVVSSP DSKWLAYTRN NTNYLRDLYL YNIKDKSHHK ITDGMSDNAE
PVFSPDGQYL YFASSTNKGL TAFGLDLSSQ ERPQRYGLYA AVLQQDGQSP LMPKLADEAY
RSVNGSQDKD EEEADDSLPS IDIKGLSKRI VALPVPQRNY WGLTATDDNN LYFIEGVQIG
SSIELDGKPL RSSQLKRFNF EERKVDKVAE KIESVTVSAD GKQLLLVGEG NALSTATVAE
KVEVTPLNTA DVKARINPTQ EWAQIFDEAW RNERDYFYDP KMHGLDWQGV YDKYQPLFKH
VGRREDLNNL MREMISEMQV GHNYIIGGDV HREETMKVGL LGADFEVKNG LYRIKNIYTG
EAWNPHLKAP LAVPGNKVSV GDYILEVDGQ PLDASINLYS LFVGKVDKQV RLTVSPNGKA
KKAHTLVVEP IKSEFDLRHW HWIEDNRNYV TKATGGKVGY VYLPNTTTAG YTSFNRMFFA
QVDRKGVILD ERSNGGGQAA NYIIDVLNRQ YLSGWKYRSG DMVYDTPAGA IYGPKVMLID
QDAGSGGDFL PYAFKRLELG TLVGKTTWGG LIGISANRDF IDGGRVTVPN FRFFTPDHEW
RVENEGVAPD IEVELDPVAV NKGQDPQLDR AIKEVQQQLK SFKPVRHDTP PAFPTELGR
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