Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_3660 |
Symbol | |
ID | 6117994 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 4461632 |
End bp | 4463203 |
Gene Length | 1572 bp |
Protein Length | 523 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641635211 |
Product | sulfatase |
Protein accession | YP_001762017 |
Protein GI | 170727991 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3119] Arylsulfatase A and related enzymes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000523129 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.837026 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGACCT TTACTCGATC AGTGCTACTC ACATTGATTA CAGGAGCACT TGTCGGCGGA TGCAACTATG CAGAACAGCC GATACAACCC GAAGCTAATG CCAACTTAGC TTCCACCGAA TTAGGTAAAC CTAACTTAGT GATCATCTAT GCAGATGATC TTGGTTATGG TGATATCAGC AGCTATGGAG GCACCGGAGT CAACACCCCC AATATCGATG CCTTAGCAGC AAAGGGACTT AGGCTAACAG ATTCTCACGC CTCAGCTGCA ACCTGCACAC CGTCACGTTA CTCCCTACTG ACAGGAGAGC ATGGCTTTCG CTCCGATGCA GCCATTTTAC CCGGTGATGC ACCGCTATTG ATTAGCCCCA AACAAGCCAC GCTACCAAAA CTACTCAAAC GTGCAGGTTA TGCATCGGCT GTTATCGGCA AATGGCATCT AGGATTAGGT TATGGTGACG TTGATTGGAA CCAGGCTGTC AAACCAGGTC CTCTTGAGAT TGGTTTTGAC TACAGCTTTC TTTTACCCGC TACTGGTGAC AGAGTGCCAA CGGTATTTTT GGAAAACCAC CATGTATTAG ATCTGCAAGC GACAGATCCT CTCTCAGTAA GTTATCAGGA GAATATTGGC ACGCTCCCCA CTGGCATCTC ACACCCTCAG CTGTTAAAGA TGAAAGCCGA TCCCCAGCAC AGCAATACCA TAGTCAATGG TGTCAGCCGC ATTGGTAGCA TGACTGGCGG CGAGTCCGCT TATTGGATAG ATGAAGATTT TCCTGACATC TTTACCGCCA AAGCCGTCGA CTTTATTCGA GAACATAAGG ATCAACCATT TTTCCTATTT CATTCAATGC ATGATATCCA TGTCCCCCGT TTACCCCATA AGCGTTTCCA AGGGAAAAGC GGTATGGGCC CCAGAGGAGA TGCAATAGTT CAGCTGGATT GGATGACAGG ACAGATAGTT AAAGAGCTAG AAAAACAAGG CATTGCTGAA AATACTATCG TCATTTTCAC CAGTGATAAT GGCCCAGTAC TGGATGATGG TTACCATGAT AATGCCGTTG AGATGTTAGG CAATCATAAG CCTTCTGGGC CATTTCGTGG TGGAAAATAC AGTGCATACG AAGCGGGTAC CCGCGTACCT ACCATCGTCT ATTGGCCTGA ACATATTCAG CCTAAAGAGA GTGATGCATT AACCACACAA ATTGATATCT ACGCATCTAT GGCTGAGTTA CTGAGACTCG ATTTAGTAGA AGACGAGGCC ATAGACAGTA TACCTCAGCT GGATGCCTGG TTAGGCAGAA CAGAGAACGG ACGTGAATTT TTAGTAAAAG AGTCCGTTGG AACCATCTCT CTGCGTCATG GAGAGTGGAA ATACATTCGC CCATTTCTCG ACGATGCTTT ACCTGATTGG CTCAAGAACA AAGATATAGA GGTAGGATTA CAAAAGTCGG AGCAACTATA CAAATTAACA GATGATATGG CTGAGCAACA TAACTTAGCA AACAGCCATA GTGATCGGGT CAATAACATG AAACAAAAGC TAGAGCAGAT CATCGAATCT GGTTATCGAT AA
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Protein sequence | MMTFTRSVLL TLITGALVGG CNYAEQPIQP EANANLASTE LGKPNLVIIY ADDLGYGDIS SYGGTGVNTP NIDALAAKGL RLTDSHASAA TCTPSRYSLL TGEHGFRSDA AILPGDAPLL ISPKQATLPK LLKRAGYASA VIGKWHLGLG YGDVDWNQAV KPGPLEIGFD YSFLLPATGD RVPTVFLENH HVLDLQATDP LSVSYQENIG TLPTGISHPQ LLKMKADPQH SNTIVNGVSR IGSMTGGESA YWIDEDFPDI FTAKAVDFIR EHKDQPFFLF HSMHDIHVPR LPHKRFQGKS GMGPRGDAIV QLDWMTGQIV KELEKQGIAE NTIVIFTSDN GPVLDDGYHD NAVEMLGNHK PSGPFRGGKY SAYEAGTRVP TIVYWPEHIQ PKESDALTTQ IDIYASMAEL LRLDLVEDEA IDSIPQLDAW LGRTENGREF LVKESVGTIS LRHGEWKYIR PFLDDALPDW LKNKDIEVGL QKSEQLYKLT DDMAEQHNLA NSHSDRVNNM KQKLEQIIES GYR
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