| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3406 |
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| Symbol | |
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| ID | 6117738 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 4166273 |
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| End bp | 4167925 |
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| Gene Length | 1653 bp |
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| Protein Length | 550 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641634961 |
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| Product | amidohydrolase 3 |
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| Protein accession | YP_001761769 |
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| Protein GI | 170727743 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1574] Predicted metal-dependent hydrolase with the TIM-barrel fold |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.155233 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGTCA ATAAAGTAGT GAAAGCTCTT ATCACTAGCG GGTTATTTCT CAGTTTTACC
TCCTATGCTC AAACCAGTTT AATCTCAAAT GTCTCAGGTT ACAGCGTCAA TGACGGTGTG
CTTACGCCGT TTAGTGCTAT TGCATTTGAA GGTGACAAGG TGTTGAAACT TTATGGTAAA
GATGAGCCTT TACCTAAAAA GGAGAGCATC GTCTATATCG ACGGTGAGGG ACAAACCATG
CTCCCAGGCC TAATTGATGC CCATGGTCAT GTGTTGAGTT ACGGTTTGAG CTTGATGCGA
GCACAGCTCA GGGGAGCTGA GTCCGAGAGT GAGGCGGTTA AGCGGGTTAA GCTTTTTAGG
GATGCACAAC CTGAGCTTAA TTGGGTGCAG GGAAGGGGCT GGAATCAAGT GTTATGGCCA
AGTAAGTCAT TTCCTAGTGC CAAGAGTTTG GATAAAATTT TTCCCGATAC ACCAGTATGG
TTAATCCGCA TTGATGGTCA TGCAGGCTGG GCGAACAGTG CAGCTATGAC CCTGTCAAAT
ATCAACGCCC AAACTCAGTC ACCTGAGGGC GGGGAGATTA TTCGTGATGC TAGTGGTCAG
CCGACAGGGG TTTTTATCGA TAAAGCCATG TCTCTTATCT CCCAAAATAT TCCAAGTTTA
ACCCAAACAG AACAAAGAGC CGTGTTGAAA CTCTCCATGA AGGAGTTATC AAAGCTTGGG
CTGACCAGCG TTCATGATGC GGGAGTTGGC AATGATACTT TAGAGGCTTA CCTCAGTTTG
GCTAAAGCGG ATGAGATGCC TATTAGGATC TACGGGATGC TCGATGCCGA TGATCGTCAC
TTTAGTGAGT TGATGAAACA GGGGCCGATA CGCTTACCTG AACATAAGCT AGATATTGCG
AGTGTAAAGA TCTCAGCCGA TGGAGCTTTA GGCAGCCGAG GTGCGGCGCT TATTGAAGAT
TACAGTGATC AAGAAGGAAA TAATGGCTTA CTCCTGTACC CTGAAGGGGA GATGGCCAAG
GTGATGAAGC TGGCCATGGA ATCTGGTTTT CAAGTCAATA CCCACGCCAT AGGCGATCAG
GCTAATAAAC TCGTACTGGA TAACTACCAA GACTTGATTA AAGAGACCAA TACTGGCGAG
TTAAGGCATA GGGTTGAACA TGCTCAAGTG CTTAGGCTGG AGGATATTCC CCGATTTGCC
AAGCTCAATG TCATCGCCTC TATGCAAGCG ACCCATGCTA CTAGCGATAA GAACATGGCA
CTCGACCGTC TCGGCAGTGA GCGTATTAAA GGTGCTTATG CTTGGCGAAG GCTGCTTGAA
AGTGGGGCAG TGATCGCCGC GGGCTCTGAC TTTCCTATTG AATCGGCAAA TCCCTTCTTT
GGTTTACACG CCTCTGTCAC CCGCCAAGAT CAGCAAAATA GGCCTGAAAA TGGCTGGTAC
AGCTCCCAGA GTATGACATT AACTCAAGCC CTTAACTCCT TCACCCAAGG GGCGGCATAT
GCAGCCCATC AAGAATCCCT TATAGGCCAA TTAAAGCCAG GTATGAAGGC GGACTTTATT
CTGGTCGACC AAGATATCTT TGCTATTCCA GCATCTGAGT TATGGCAAAC TCAAGTAAAT
CAGACCTGGA TTGATGGCAA ACGTATCTAC TAA
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| Protein sequence | MIVNKVVKAL ITSGLFLSFT SYAQTSLISN VSGYSVNDGV LTPFSAIAFE GDKVLKLYGK
DEPLPKKESI VYIDGEGQTM LPGLIDAHGH VLSYGLSLMR AQLRGAESES EAVKRVKLFR
DAQPELNWVQ GRGWNQVLWP SKSFPSAKSL DKIFPDTPVW LIRIDGHAGW ANSAAMTLSN
INAQTQSPEG GEIIRDASGQ PTGVFIDKAM SLISQNIPSL TQTEQRAVLK LSMKELSKLG
LTSVHDAGVG NDTLEAYLSL AKADEMPIRI YGMLDADDRH FSELMKQGPI RLPEHKLDIA
SVKISADGAL GSRGAALIED YSDQEGNNGL LLYPEGEMAK VMKLAMESGF QVNTHAIGDQ
ANKLVLDNYQ DLIKETNTGE LRHRVEHAQV LRLEDIPRFA KLNVIASMQA THATSDKNMA
LDRLGSERIK GAYAWRRLLE SGAVIAAGSD FPIESANPFF GLHASVTRQD QQNRPENGWY
SSQSMTLTQA LNSFTQGAAY AAHQESLIGQ LKPGMKADFI LVDQDIFAIP ASELWQTQVN
QTWIDGKRIY
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