Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_3399 |
Symbol | |
ID | 6117731 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 4158152 |
End bp | 4159732 |
Gene Length | 1581 bp |
Protein Length | 526 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641634954 |
Product | methyl-accepting chemotaxis sensory transducer |
Protein accession | YP_001761762 |
Protein GI | 170727736 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGAAC AAACCTTAGC TCGAACACTA TCTGTTTTTT TCGTGGTCTT TATCTGCAGC ATGCTTTTGG CGAGTTTGCC TTGGCAGCTT AATATGCTTG TGACCAGTTT TCTGTTAGCG CTGCTCAGTA CTTTGCTGAT GTTCCTAGTG GGACGCTGGC TCGATATAAG AGTTGAACAG AGAGTGAGCA GAGAGACTCA AACAGCCGAG TCTAGCCATA TTAATCAGGC GACTAAGCAG ATCAGTCTTC ACACGAGTAA GATTGCCATT GGCGCAGCCG AGGTCTCCCA CTTTATCGAT ACTCTTAATC TCTCCATTGA AAAAAACGGT GAGAGTGCCA GCCAGATCTC TGTTGCGGCA GAGGAGCTTA GTGTCACCAC TGGCCAGTTG AGTGATAACG CAGCCCATAT TCTCCTTCAG GCTCAAGATG CTGAACGCTT TAGTGTTGAG GGGCGTGCTC AAGCTGAAGT GGGTGTTGAT ACCATAGAGT CACTGAGTGT AGACATTAAT ACAGCCGCTC AGCAGGTTCA TGCGTTAAAG GAGAAAGCTC AGAGCATTCA AAATATTACA GAGTTAATTA ACTCTGTTGC TGAGCAGACA AACTTGCTGG CTCTAAATGC CGCTATTGAA GCGGCGCGAG CCGGTGATCA GGGACGCGGT TTTGCAGTGG TAGCCGACGA GGTACGAAAC TTAGCAGGCA AGACTGCCCA AGCCACCGGC GACATCGCTA AGATGCTTTT GGAGGTTAGC TCAGAGGCTG ATAGGACATC AGGTTTAATG GAGCAGGTGG TGTGCAAAAC CTCAGGTACG GTTGAGGTGA TGGCTAAGCT TGATGTGAGT TTCAATCAGA TCTCTTTGTC GATAGCTCAA TCTGCGGAGT CTTTGAGTCA GATGGAGGAA GCATTGAAAG AGTCAACCAG CACCACCCAT GAGATCTCCG GCTCTGTTGC TCAGATCCAT GACTCATTAG AGAGTACCGC AGAGCAAAGT AGTCGTGTGT CTGAACAAGC CTTCGGACTA TCTAAAACCA CCGAAGGAAT ATTTACTGAA CTGGCAGATT TCGACACACA AACTTTAGAT CAAAGGGTGC TTAAACAAGC CCGAGAGGGG GCGAAACAGT GTGGAGCTTT ATTGGAGGCG GGTTTAGTGA GTGGCAAGTT TAGAGAGCAT GACCTCTTCT CTCCACAATA TCGGCCTATT TCCAATACTG ATCCCGTTAA ATATAGCACC GAATTTGATA GTTACACAGA TAGCTGTTTT CCCGCGGTTC AGGAGCCGAT ACTGGGGAGT CACAGGGAGA TAGTGTATGC AGGTTGTGTG GATATGAAGG GCTACTTTCC AACCCATAAC CTCTGTTTCA GTAAAAAACT CACAGGCAAA GCCGAGATAG ATATACTCAG TAACCGCACG AAGCGGCTTT TTGACGATCC TACTGGCATT CGCTGCGGCC AACATACTCA AGCTGTGTTG TTACAAACCT ATAAGCGTGA CACTGGTGAG GTGATGCACG ATCTCTCTGT GCCTATCTTT GTAAAAGGTA AACACTGGGG CGGATTTAGA GTCGGCTTTA AGGCGACTTA A
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Protein sequence | MAEQTLARTL SVFFVVFICS MLLASLPWQL NMLVTSFLLA LLSTLLMFLV GRWLDIRVEQ RVSRETQTAE SSHINQATKQ ISLHTSKIAI GAAEVSHFID TLNLSIEKNG ESASQISVAA EELSVTTGQL SDNAAHILLQ AQDAERFSVE GRAQAEVGVD TIESLSVDIN TAAQQVHALK EKAQSIQNIT ELINSVAEQT NLLALNAAIE AARAGDQGRG FAVVADEVRN LAGKTAQATG DIAKMLLEVS SEADRTSGLM EQVVCKTSGT VEVMAKLDVS FNQISLSIAQ SAESLSQMEE ALKESTSTTH EISGSVAQIH DSLESTAEQS SRVSEQAFGL SKTTEGIFTE LADFDTQTLD QRVLKQAREG AKQCGALLEA GLVSGKFREH DLFSPQYRPI SNTDPVKYST EFDSYTDSCF PAVQEPILGS HREIVYAGCV DMKGYFPTHN LCFSKKLTGK AEIDILSNRT KRLFDDPTGI RCGQHTQAVL LQTYKRDTGE VMHDLSVPIF VKGKHWGGFR VGFKAT
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