| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3394 |
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| Symbol | |
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| ID | 6117726 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 4151808 |
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| End bp | 4153319 |
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| Gene Length | 1512 bp |
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| Protein Length | 503 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641634949 |
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| Product | catalase |
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| Protein accession | YP_001761757 |
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| Protein GI | 170727731 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0753] Catalase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.841138 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATATAA CAAAAAAGAG CTGTTTAGTA TTATCGATGA GCCTGGCATT CAGTGTCCAA
GCTGAAACAT TAACCCGTGA CAATGGCGCC CCAGTGGGTG ACAACCAAAA TTCAATCACC
GCAGGCAGTA ATGGCAGCGT ACTGCTACAA GATGTCCAGT TAATCCAAAA ACTACAACGT
TTTGCTCGTG AACGTATTCC TGAGCGTGTG GTTCACGCCA GAGGAACCGG TGTCCATGGT
GAGTTTGTGG CCAGCACTGA TCTAAGTGGT CTGACTCAAG CAGCGCCATT TGCCGAAAAG
GGCAAGGTCA CCCCTGTTTT TGTTCGTTTC TCAACGGTTA TTCACTCTAA AGGTTCACCA
GAAACCCTGC GCGACCCTCG TGGATTCGCA ACTCGTTTCT ATTCAGATCA AGGTAATTGG
GATCTAGTGG GTAACAACCT ACCAGTATTC TTTATCCGCG ATGCGATCAA GTTCCCAGAT
ATGGTGCACT CACTTAAACC ATCGCCTGTG ACCAATCTTC AGGATCCAAA CCGTTTCTTC
GATTTCTTCA GCCACGAAGG TACAGCAACC AATATGCTGA CCTGGGTTTA CACTAACTTA
GGCACTCCGT CGAGCTACCG TAAGATGGAT GGCTTTGGTG TACATGCATA CAAGTTTATT
AACGATGAAA ACCAAGTGAA ATACGTTAAG TTTCACTGGA AAAGCCAGCA AGGTGTTGAG
GGGTTAAGAC CTAACGAAGT CACTAAAATT CAGGGTCAAA ACTTTAATCA CCTGACCGAT
GATCTTTACA GTGAGATTAA CAAGGGTAAC TACCCGAAAT GGGATCTTAA GGTCAAAGTC
TTGAGCCCAA GCGATCTGAA CAAGTTCGAC TACAACCCGC TTGATGCAAC CAAGATGTGG
CAAGATGTAC CAGAGACGAC CGTGGGTACT ATGACCCTAA ACCGTGTTCC AGGTAACTTC
TTCCAAGAGA CTGAGCAAGC AGCGTTTGCA CCATCTAACT TAATTCCGGG TATCGAGCCT
TCAGAAGATA AGTTGCTCCA AGGACGTATC TTCTCCTATG CCGACACTCA GCTTTATCGT
TTAGGGGCAA ATCTGTCTCA CCTGCCGATC AACCAAGCTA AAGTCACGGT GGCAAATCAC
AACCAAGAGG GTGCGGGTAA TTACGGCCAC ACCAGCTCAG ATGTGAACTA TCAGCCTAGC
ACTAAACTGG CACTGACTGA TGACTCTCGC TACCGCGCCG TAAACACAAA GCTTTCAGGT
ACTGTGCAGC AGGCTGTTAT CAAAAAGCAG GACAACTTCA CTCAAGCTGG CGTTTTGTAC
CGTAGCCTAA GCAAGCAAGA TAAGAGCGAC CTTATCACGA ACCTATCTGG CGACTTAGGT
AAGGTAGAGG ACAGTAATGT TAAACATCAG ATGCTGAGCT ACTTCTACCA AGCAGATAAA
GAGTTCGGTC AACGTTTAAC TAAAGCCGTC AATGGCGACC TCAAAGAAGT GAAAAGAAGA
GCCAAGAGTT AA
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| Protein sequence | MDITKKSCLV LSMSLAFSVQ AETLTRDNGA PVGDNQNSIT AGSNGSVLLQ DVQLIQKLQR
FARERIPERV VHARGTGVHG EFVASTDLSG LTQAAPFAEK GKVTPVFVRF STVIHSKGSP
ETLRDPRGFA TRFYSDQGNW DLVGNNLPVF FIRDAIKFPD MVHSLKPSPV TNLQDPNRFF
DFFSHEGTAT NMLTWVYTNL GTPSSYRKMD GFGVHAYKFI NDENQVKYVK FHWKSQQGVE
GLRPNEVTKI QGQNFNHLTD DLYSEINKGN YPKWDLKVKV LSPSDLNKFD YNPLDATKMW
QDVPETTVGT MTLNRVPGNF FQETEQAAFA PSNLIPGIEP SEDKLLQGRI FSYADTQLYR
LGANLSHLPI NQAKVTVANH NQEGAGNYGH TSSDVNYQPS TKLALTDDSR YRAVNTKLSG
TVQQAVIKKQ DNFTQAGVLY RSLSKQDKSD LITNLSGDLG KVEDSNVKHQ MLSYFYQADK
EFGQRLTKAV NGDLKEVKRR AKS
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