Gene Swoo_3387 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_3387 
Symbol 
ID6117719 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp4145818 
End bp4146372 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content43% 
IMG OID641634942 
Producthypothetical protein 
Protein accessionYP_001761750 
Protein GI170727724 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAAAAA ATCTGACCCC CTTTAGCAGC GATGATATCT CGGCGTTGGC TAAATCATTG 
CGCAAACAGT TACAACAACA TGAGTCGTTT CCTAGCCATG TGGAGATGTT AAACATCTTA
GCTAAGGCCA AAGGTCTGCA AAACTTCCAG CAGTTACGTC AGCAGCATGA AGAGCTGTTA
CTCTCTTTGC AACCTAAGTT ATCAGTTCCT ATCCCTAAGA AGTTAAAGCC CTTTATGAGT
GCTGATTATG TGATGCAGGG TTGGCCTGCA AAATATGCAA TTCAGCAGCT GAGCTTGTGG
TTTTTCTGGT GCAGATTTCA GTACCAAAAG AGCTATAGCG AGCAGCAAGT CAATGATATT
TTAATCGATT ATCTCGAATT TAAGGATTTT GCCTTAATTC GCCGTGAACT TTGTAACCAT
AAACTACTTA AACGTACCGA TGATGGGCGC ACTTATTGGC GCGCTTCTGC AACGCCACCA
GAAGGTTTTG AGCCTCTGGC TGATGTGTGG TCTAGCCAAT TCATCTCTAC TCAATTAAAA
AGCCAGATCA ATTGA
 
Protein sequence
MSKNLTPFSS DDISALAKSL RKQLQQHESF PSHVEMLNIL AKAKGLQNFQ QLRQQHEELL 
LSLQPKLSVP IPKKLKPFMS ADYVMQGWPA KYAIQQLSLW FFWCRFQYQK SYSEQQVNDI
LIDYLEFKDF ALIRRELCNH KLLKRTDDGR TYWRASATPP EGFEPLADVW SSQFISTQLK
SQIN