| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3256 |
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| Symbol | |
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| ID | 6117575 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 3991965 |
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| End bp | 3992843 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641634800 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001761621 |
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| Protein GI | 170727595 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.14149 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGACTTA GACACATAGA GATATTTCAC GCCATCTACA CCACAGGCTC TATCACCAAT
GCTGCTAAAA TCTTGCATGT GTCTCAACCC TCAGTCAGTA AGGTGCTGTC ACACGCCGAG
CTGCAGTTGG GATTTCAGTT ATTCAACCGA GTAAAAGGGC GATTGACGCC CACCGAAGAA
GCAAAAATAT TATTTGGTGA TGTTGATAAA ATCTATCAAC AATTAAGATC CATTAAAAAC
ACGGCTAACA ATATTAAAAA ATCAGAATTT GGAAGCATCA AAATAGGGCT TACCCCTGCA
CTTGGTTTTG ACAGCATTCC AGAAGCCGTG GCCAACTTTC ATCGTGATCA CCCTGCAGTG
AGTATTCAAT TGCAGACCAT TCACAATGAA TCGGTGATGC ACACCCTGCT TGAAAGAAAG
TGCGACCTTG CCATTGTCTT CTCCCCGGAT AAACAACCTG GTCTCAATGA GATAGAACTG
GCTCGCTCAG AACTCACCAT CGTTTACCCT AAGGCACTGT TCCCGCACTG CCCCACTAAA
CTCTCTTTTG CAGAGCTGAG CGAACATGAA TTTATCGACA TCGGAGATAG CGGTCCACTT
GGGGATCTAC TCTGGACTCG AATGCTTGAA GAGAATATCA ATATAACCCC CAATATTAGG
GTACAAACCT ATTTCCTTGC AGCCAGAATA GTGGCGCAAA ATATTGGACT GTGTGTGGTC
GATAAACTTA CCGCCCTTGG CAATCTATCC CCAAATACGG CAATGGCTTC ATTTGACCCA
CCATTAGAGT TTAGTATCAG TGCATTACAC TTAGAGAACA GCAATTTATC TTCCGCTAAC
AAAGAGTTTT TAAATTATTT AACCAGTGTA ATATCATAG
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| Protein sequence | MRLRHIEIFH AIYTTGSITN AAKILHVSQP SVSKVLSHAE LQLGFQLFNR VKGRLTPTEE
AKILFGDVDK IYQQLRSIKN TANNIKKSEF GSIKIGLTPA LGFDSIPEAV ANFHRDHPAV
SIQLQTIHNE SVMHTLLERK CDLAIVFSPD KQPGLNEIEL ARSELTIVYP KALFPHCPTK
LSFAELSEHE FIDIGDSGPL GDLLWTRMLE ENINITPNIR VQTYFLAARI VAQNIGLCVV
DKLTALGNLS PNTAMASFDP PLEFSISALH LENSNLSSAN KEFLNYLTSV IS
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