Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_3247 |
Symbol | |
ID | 6117566 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 3977489 |
End bp | 3978277 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 641634791 |
Product | peptidase S1 and S6 chymotrypsin/Hap |
Protein accession | YP_001761612 |
Protein GI | 170727586 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAATTTT GGCTTTTTTT ATTCTTTTGT TTCTACTCTC TCGCTGGCAA TGCCGTTGTG AAAAGGCATG ATATTCCCCC AGAAGATTAT GTTTTAAATA AAATACCTGC ATACCTAATT GATATGCCCC ACGAAGGTCA TGGCGTACTC ATCAATTCGC AATGGGTTGT GACCGTAGCA CATACTATTT TTTATGATTA TATCGGTAAA AAATTAATAG TTGGTTCAAA AGGTTATGAA ATTGAAAGCG TTCATATACA CCCAGATTAC ACTCAACCTC ATAAAGGTTT ACTTAAAGGC GATTTAGCGC CCTTAATGAG TTTCTTTAAA TCTAGAAGTG ATATTGCTTT AATTAAATTA ACTTCAAGGG GTAATGATGT AGAACCAATC AATATGTATG CGGGTTCAAG CGAGAAAGGT AAAACAATTA CAGTCTATGG TAGAGGGGCT ACTGGGAACG GATTAACTGG TGAAGACCCA GATACCAAAT CACTTCGTGT GATGAACCAG TTTCAAAATA TTGTTGAGAG CGCGGAAGGT AACTGGTTAG TATTTAAATT TGACGAGCCA GCAAACGCAT TACCACTTGA AGGTATGCAT GGTTCGGGAG ATAGCGGTGG AGCTGCGGTT ATATTTCAAC AAGGAGTCCC TTATCTTATT GGGTTATCAA GTTGGCAACT CGGGCATGGC GACATAGCTT CTTTTCAAGG TGGTTTGTAT GGCACTACAG CTTACCAAGT TAGGGTGTCA AATTATCAAG GTTGGATATC AAGTGTATTA GGGCGTTAA
|
Protein sequence | MKFWLFLFFC FYSLAGNAVV KRHDIPPEDY VLNKIPAYLI DMPHEGHGVL INSQWVVTVA HTIFYDYIGK KLIVGSKGYE IESVHIHPDY TQPHKGLLKG DLAPLMSFFK SRSDIALIKL TSRGNDVEPI NMYAGSSEKG KTITVYGRGA TGNGLTGEDP DTKSLRVMNQ FQNIVESAEG NWLVFKFDEP ANALPLEGMH GSGDSGGAAV IFQQGVPYLI GLSSWQLGHG DIASFQGGLY GTTAYQVRVS NYQGWISSVL GR
|
| |