Gene Swoo_3247 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_3247 
Symbol 
ID6117566 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp3977489 
End bp3978277 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content39% 
IMG OID641634791 
Productpeptidase S1 and S6 chymotrypsin/Hap 
Protein accessionYP_001761612 
Protein GI170727586 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTTT GGCTTTTTTT ATTCTTTTGT TTCTACTCTC TCGCTGGCAA TGCCGTTGTG 
AAAAGGCATG ATATTCCCCC AGAAGATTAT GTTTTAAATA AAATACCTGC ATACCTAATT
GATATGCCCC ACGAAGGTCA TGGCGTACTC ATCAATTCGC AATGGGTTGT GACCGTAGCA
CATACTATTT TTTATGATTA TATCGGTAAA AAATTAATAG TTGGTTCAAA AGGTTATGAA
ATTGAAAGCG TTCATATACA CCCAGATTAC ACTCAACCTC ATAAAGGTTT ACTTAAAGGC
GATTTAGCGC CCTTAATGAG TTTCTTTAAA TCTAGAAGTG ATATTGCTTT AATTAAATTA
ACTTCAAGGG GTAATGATGT AGAACCAATC AATATGTATG CGGGTTCAAG CGAGAAAGGT
AAAACAATTA CAGTCTATGG TAGAGGGGCT ACTGGGAACG GATTAACTGG TGAAGACCCA
GATACCAAAT CACTTCGTGT GATGAACCAG TTTCAAAATA TTGTTGAGAG CGCGGAAGGT
AACTGGTTAG TATTTAAATT TGACGAGCCA GCAAACGCAT TACCACTTGA AGGTATGCAT
GGTTCGGGAG ATAGCGGTGG AGCTGCGGTT ATATTTCAAC AAGGAGTCCC TTATCTTATT
GGGTTATCAA GTTGGCAACT CGGGCATGGC GACATAGCTT CTTTTCAAGG TGGTTTGTAT
GGCACTACAG CTTACCAAGT TAGGGTGTCA AATTATCAAG GTTGGATATC AAGTGTATTA
GGGCGTTAA
 
Protein sequence
MKFWLFLFFC FYSLAGNAVV KRHDIPPEDY VLNKIPAYLI DMPHEGHGVL INSQWVVTVA 
HTIFYDYIGK KLIVGSKGYE IESVHIHPDY TQPHKGLLKG DLAPLMSFFK SRSDIALIKL
TSRGNDVEPI NMYAGSSEKG KTITVYGRGA TGNGLTGEDP DTKSLRVMNQ FQNIVESAEG
NWLVFKFDEP ANALPLEGMH GSGDSGGAAV IFQQGVPYLI GLSSWQLGHG DIASFQGGLY
GTTAYQVRVS NYQGWISSVL GR