| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3191 |
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| Symbol | |
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| ID | 6117510 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 3918207 |
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| End bp | 3920489 |
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| Gene Length | 2283 bp |
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| Protein Length | 760 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641634736 |
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| Product | copper-translocating P-type ATPase |
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| Protein accession | YP_001761557 |
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| Protein GI | 170727531 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2217] Cation transport ATPase |
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| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01511] copper-(or silver)-translocating P-type ATPase
[TIGR01525] heavy metal translocating P-type ATPase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.427707 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.767066 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAGCA TAACCTTATA TGTTCCCACG ATGAATTGCG CTAGTTGTGT CGCCAAAATT
GAGCGAGCTT TTAGCGCATT AGAGCAAAAA AAATCTGCTA TCAATGCCAG AGTGAACTTG
GCCGATAAAC AGGTCATTGT AGAGGGAGAA ATTTGTGCTC AATTGGCAAT AGAGACGATT
GCCAGTGTCG GTTATGCCAG TGAGCAGATA CAGGATGTAA AACGTGCTGC GCAAGTTAAA
GCGAAAGAGG AGGCGTGTGA GTATCGCACC CGCATTATCC AATCTTTACT GGGCTTAGGT
CTGGGGATCC CTATGATGAT TTGGGGATTG TTAGGTGGGG AGATGATGGT CAATAGTCCT
GCTCAGCAGT TTGGCTGGGG TGTGATGGGA GTTATCACTT TACTGCTCTT AGTCACGACT
GGCGGACATT TCTATAAAGG GATGTGGCGT TCACTTAAGG TCGGCAGTGC CAACATGGAT
ACCTTGATTG TGCTGGGAAC CAGCTCAGCT TGGCTTTATT CCATGGTGGT AGTGCTGCTA
CCCGATGCAT TTCCTCCCTC GGCTCGTCAC GTTTACTTTG AGGCGAGTGT GATGATTTTG
GGCCTAATTA ATTTGGGTCA TGCCTTAGAG TTAAGCGCAA AGGGAAAGAC CAGTGAAGCG
GTGCAGAGGT TGGTCGGCTT ACAGTCGACC ACAGCAACGA AAATAACTGA CACAGGCGAT
ATCGAAGTTG AGATTGCTGA GATTAAACTG GGTGATAGGT TAAGGCTTAA GCCTGGAGGA
CGTGTTGCCC TAGATGGTGA AGTGATTGAG GGGAGTTCAA CAATCAATGA GTCAATGTTG
ACCGGAGAGC CGTTGCCTGT GAATAAGGTG ACTGGCGATC TGCTTAGCGC CGGCACAGTT
AATGGCAATG GCACGATTAT TTACCAAGTG ACTGCTGGCC TGGGTGATAC ACGACTGTCC
AAAATCATTG ATCTTGTTCA GCAGGCTCAA ACATCTAAAC TGCCAATCGG GCGTTTAACC
GATAAAATAT CAGCCTACTT TGTGCCAGCG GTGGTGCTTA TCGCGATGAT TGCATCAAGT
ATCTGGTATC TGTCTGGTCC AGCGCCCCAG TTATCTCATG CTTTAATTGT GCTAACCAGT
GTGCTTATTA TCGCTTGTCC CTGCGCATTA GGACTCGCGA CACCTATGTC GATTATGGTG
TCTGTTGGTC GAGCAGCTCA GATGGGAGTG CTGATTAAAA ATGGCGAGGC ACTTCAATTA
GCCAGTAAAG TGACCTGTGT TGTTTTGGAT AAAACTGGCA CTATTACACA GGGTAAACCG
AGTGTGACAG ATGTGATGAT TATCTCAAAG AGTGGAGCCA CTTCTGAAGT TGATGATAAG
GATCTAGCTT TGCAGCAACT CTTTACCCGA GTGGCCAGTT TAGAGCGTTA CTCCGAGCAT
CCATTAGCCA GTGCGGTACT TGAAGAGGCC AAGGTAAGAG AGTTGGTACT GTTTGAGCCA
GAATCCTTTA CCAATGTTCA AGGAAAAGGG ATCTTGGGTG TGGTAGATGG CTGTTCATTG
GCGGTGGGAA ACCGCAGCTT AATGCAGAAC GAAGGAGTAT CAGGCTTAGA TAGATTTGAT
GCTGAGATTA GTCAATTTTC AGCGCAAGCT AAGACCCCTG TCTATATTGC CGAAAACGGT
CAGTTAAGCA TGATAATTGC AGTCACAGAT CCCATCAAAG CTGATGCGAA GGCTGCGATG
ACAGCATTAC TTCAATCGGG GAAGCGAGTC GTGCTATTAA GTGGCGATAA TATCCGCACA
GCAAAAGCGG TCGCGACTCA GGTTGGGATT AAAGAGGTGA TTGCCGAGGT TTTACCTGAA
CAGAAACAGG CACATATCAT TGCGTTGCAG GCTGAAGGAG AGGTGGTGGC CATGGTGGGA
GATGGGATTA ATGATGCCCC CGCTTTGGTG AGTGCCGATG TGGGTATAGC CATGGGAGAT
GGCACTCAAG TGGCCATTGA AAGCGCCGAT CTTACCTTCC TATCGGGCCG TTTATCTGTA
CTGGCAGACA CTTTTTCTCT TGCACGAGTG AGTATGCGAA ATATTAAGCA GAATCTATTT
GGTGCGTTTA TCTACAATAG TTTAGGGATC CCTATCGCAG CTGGCGTACT CTTTCCTTTT
ACGGGATTGT TACTCAGCCC TGTGATAGCG GGAGGAGCGA TGGCGCTATC TTCGTTAACT
GTGGTGACCA ATGCTAATCG TTTAAGGTAT GTAAAGTTAA ACTCAAGCAC GCCTGAAGTT
TAA
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| Protein sequence | MNSITLYVPT MNCASCVAKI ERAFSALEQK KSAINARVNL ADKQVIVEGE ICAQLAIETI
ASVGYASEQI QDVKRAAQVK AKEEACEYRT RIIQSLLGLG LGIPMMIWGL LGGEMMVNSP
AQQFGWGVMG VITLLLLVTT GGHFYKGMWR SLKVGSANMD TLIVLGTSSA WLYSMVVVLL
PDAFPPSARH VYFEASVMIL GLINLGHALE LSAKGKTSEA VQRLVGLQST TATKITDTGD
IEVEIAEIKL GDRLRLKPGG RVALDGEVIE GSSTINESML TGEPLPVNKV TGDLLSAGTV
NGNGTIIYQV TAGLGDTRLS KIIDLVQQAQ TSKLPIGRLT DKISAYFVPA VVLIAMIASS
IWYLSGPAPQ LSHALIVLTS VLIIACPCAL GLATPMSIMV SVGRAAQMGV LIKNGEALQL
ASKVTCVVLD KTGTITQGKP SVTDVMIISK SGATSEVDDK DLALQQLFTR VASLERYSEH
PLASAVLEEA KVRELVLFEP ESFTNVQGKG ILGVVDGCSL AVGNRSLMQN EGVSGLDRFD
AEISQFSAQA KTPVYIAENG QLSMIIAVTD PIKADAKAAM TALLQSGKRV VLLSGDNIRT
AKAVATQVGI KEVIAEVLPE QKQAHIIALQ AEGEVVAMVG DGINDAPALV SADVGIAMGD
GTQVAIESAD LTFLSGRLSV LADTFSLARV SMRNIKQNLF GAFIYNSLGI PIAAGVLFPF
TGLLLSPVIA GGAMALSSLT VVTNANRLRY VKLNSSTPEV
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