| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3186 |
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| Symbol | |
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| ID | 6117505 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 3911124 |
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| End bp | 3911879 |
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| Gene Length | 756 bp |
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| Protein Length | 251 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641634731 |
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| Product | ribonuclease H |
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| Protein accession | YP_001761552 |
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| Protein GI | 170727526 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0328] Ribonuclease HI |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.576658 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAGTA AATATTATGT GGTTTGGGTG GGAAGAACCC CTGGTATCTA TACCAGCTGG
GATGAAGCTA AAAAGCAGGT CGACAAATAC CCTAAAGCCA AATACAAATC ATATAAGAGT
AAAACCGAAG CTGAAACGGC TTATGCTAAA GGCTCGACTC AGGTCTCTTA CAGCAAAAAA
AGCACAAGTT CAGCTCAGAC TCCAGCCTCC CTATCTAACC CTGCAGATGA TACTCAATAT
AACGTCGAAA TCTTCACCGA CGGCGGTTGT GAGCCTAATC CAGGAAAAGC CGGCTCCGGC
GTTGCCGTGT ATCGTGAAGG GGTATTGGCT GAGCTATGGT ATGGGCTGTA TAACAGCTTT
GGCACCAATA ACTCCGCCGA GTTAAATGCC CTACACCAGG CGCTACTGAT GGCAAAACAG
GCACTCATTG AGAATAAAAC CGTGCACATT CGCAGTGATT CCCAATACTC AATAAACTGC
ATCACCAACT GGGCATACGG CTGGAAACAG AAAGGCTGGA AACGAAAAGT CGCTGGTGAC
ATAAAAAATC TGGACATCAT TCAAGCCGCA CACGCTCTGT ATGATGAGAT AAAAGATCAA
CTTAAAATCT CTCATGTGGC CGCTCACATA GGCATAGAGG GCAATGAATT GGCTGACAGA
ATGTCAATCT ACGCGATAGA TCAACAAGAT AGTAAATTTT GCCGCTACCC AGAGCCCATC
GAACTATCGG CAATATTGAG CCTAAGAGCA GGTTAG
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| Protein sequence | MASKYYVVWV GRTPGIYTSW DEAKKQVDKY PKAKYKSYKS KTEAETAYAK GSTQVSYSKK
STSSAQTPAS LSNPADDTQY NVEIFTDGGC EPNPGKAGSG VAVYREGVLA ELWYGLYNSF
GTNNSAELNA LHQALLMAKQ ALIENKTVHI RSDSQYSINC ITNWAYGWKQ KGWKRKVAGD
IKNLDIIQAA HALYDEIKDQ LKISHVAAHI GIEGNELADR MSIYAIDQQD SKFCRYPEPI
ELSAILSLRA G
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