| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3173 |
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| Symbol | |
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| ID | 6117492 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 3890588 |
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| End bp | 3891127 |
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| Gene Length | 540 bp |
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| Protein Length | 179 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641634718 |
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| Product | tail collar domain-containing protein |
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| Protein accession | YP_001761539 |
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| Protein GI | 170727513 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4675] Microcystin-dependent protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0996292 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCAGAAC CTTTTATCGG CGAGATCAAG ATGGTGGGAT TTAACTTCGC ACCAAGAAGC
TACGCAAAAT GTGATGGTGC GCTTCTTCCC ATTTCACAAA ATACAGCCAT GTTCTCACTA
TTAGGTACGG AATTTGGTGG TGATGGTCGC ACCACTTTTG GCTTACCCGA TCTTCGTGGT
CGCACCCCAA TGCATCAAGG TAATGGTCCA GGTTTAAGCC CTAAAACAAT GGGGCAAAGC
TCTGGTAGTG AGAGCAATAC CTTGCAGTTG AATCAAATGC CCAAACATAC CCATAGCGCA
CAGTTAGATG CTGTATCTAC GGAAGGGACC TCAGCAGTAC CCGATAATAA TATGTACCTC
GCTAAATCCA GTAGTGGTTT AACTTCTGTC AACAGCTATA GCAACGGGAC ACCCGATACA
GTTATTAGTC CCCACGAAAC AAACACTGCC GGCGGCAACT CTGCGATTAA TAACATGCAA
CCCTACCAAG TCGTTAACTT TATCATTGCA ATACAGGGAC TATTTCCATC ACGGCAATAA
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| Protein sequence | MSEPFIGEIK MVGFNFAPRS YAKCDGALLP ISQNTAMFSL LGTEFGGDGR TTFGLPDLRG
RTPMHQGNGP GLSPKTMGQS SGSESNTLQL NQMPKHTHSA QLDAVSTEGT SAVPDNNMYL
AKSSSGLTSV NSYSNGTPDT VISPHETNTA GGNSAINNMQ PYQVVNFIIA IQGLFPSRQ
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