Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_2863 |
Symbol | |
ID | 6117178 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 3499197 |
End bp | 3499736 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641634409 |
Product | NADH dehydrogenase (ubiquinone) 24 kDa subunit |
Protein accession | YP_001761233 |
Protein GI | 170727207 |
COG category | [C] Energy production and conversion |
COG ID | [COG1905] NADH:ubiquinone oxidoreductase 24 kD subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.088948 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.00474747 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCAACTA GAGAGCAACA AACCATCCCT GTCTCTGTCG TTGACACCGC AGAGATCTCG TTGAGCTCAA AAGAGCAACA GGGTATCGAT GAGTTAATCT CCCACTCGCC ACAACTTGCG GGGATCACGA TTGATGCACT CAAGTTGATA CAGGCTGAGC GTGGCTGGGT AAGTGATGCT AGTTTGCATG CCCTCTCGCT CTACACTCAG ATCCCAGTTG CCGATCTTGA CAGTGTTGCC ACCTTCTACA ACCTTATTTT TCGGCAGCCA GTCGGTAAAG TGGTGTTGCA TCCCTGTGAC GGGATCAGCT GCGACTTAAT GGGGGGGGAG CATATTCGTC AATGCCTGAA GCAGCAACTA AACATCACGG CAGGGGAAAC CACAACTGAC AATCGTTTTA CCCTGATCCC ACTGCCCTGT TTAGGCGCCT GTGATAAGGC CCCAGTGATG ATAGCCAACA AACAACTCTT CGAAAATATG ACAACAGATG AGCTTCCTAA ATTACTCAGC ACACTCAGTA CATTTGGCGA GGTGAGCTGA
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Protein sequence | MATREQQTIP VSVVDTAEIS LSSKEQQGID ELISHSPQLA GITIDALKLI QAERGWVSDA SLHALSLYTQ IPVADLDSVA TFYNLIFRQP VGKVVLHPCD GISCDLMGGE HIRQCLKQQL NITAGETTTD NRFTLIPLPC LGACDKAPVM IANKQLFENM TTDELPKLLS TLSTFGEVS
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