| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2789 |
|---|
| Symbol | |
|---|
| ID | 6117098 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella woodyi ATCC 51908 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010506 |
|---|
| Strand | - |
|---|
| Start bp | 3406972 |
|---|
| End bp | 3408438 |
|---|
| Gene Length | 1467 bp |
|---|
| Protein Length | 488 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 641634330 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001761160 |
|---|
| Protein GI | 170727134 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG2267] Lysophospholipase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.561664 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACCT TAGTCATTGG TTCAACCAAG CACCTATTGA TGGCACTGTT TTATGCATCA
TTAGGGGTTG TCATTGCACT GTTATGTGGC AGCATTTGGT ATTTAACTTC TAGAGCGGAT
CTCGATGTTT GGCATAAAAC TGAGCTGAAG TCAGCCTATA AAAGGTCATT AGAGTTCGAT
AATTTTTCGC AGCTCATGGC GTTAGAACAG GTGATTTTTG ATGAAGTCGA AGAGAGGATT
TATGGACGTA CTCCTCACTC TTTTGACTCT GTGATTAACC GTTATGTTCG TGGAAGCTTA
TCAGATCCCC AAAAATGGCG TACGGACTGG AACAGAAGTT ATGAATGGCC GCAAGCTGAT
GCGGATTTTG GTGTGCTACT TCTTCATGGA ATGTCAGACT CTCCCTATGC AACTTCCCAT
CTTGCTAAAC ATTTTAAAGG AAAAGCACAT GTATTAGCTC TCAGACTACC AGGGCATGGA
ACGATACCTT CAGGACTTAT CGATATCGAG TGGCAAGATA TAGCATCGGC GGTGTCATTA
GCGACAGAGC ATATGCAAAA GGTATTAAAG GGGAAGCCCT TGTACTTAGT TGGTTTTTCA
ACAGGAGCTG CATTGGGTTT AAATCATGAA CTTGAACGGC TTATGAAGGG GCAATCTACA
GATTACTCTG GCATGATTTT TCTCTCTCCA GCGATAGGGC TATCCCCAGT GGCCGCTGGA
GCAAAGTGGC AAGCTTGGCT TGGGGAGCTA TTAGGCTTAG AGAAGTTAAG TTGGAATAGC
CTTCAAACTG AGTACGATCC GTTTAAATAT AACTCGTTTG CTGTCAATGC GGGTGACGTG
GTTTATCAGC TTGCTATGCG TAATCAATGG CTGTTAAGCC AATTATCTTC AGAGGCGTTA
CTAAGCCTCG AAACTTCACT GACCTTTCAA TCATTAGTGG ATGACACGGT CTCTACTGGG
GCCGTTGTGA CTGATTTTTA TCAAAAGCTC CCTGAAAATG GTCATGAGTT GGTGATATTT
GATATTAATC GAACCGAAGT CAATATGGGA TTGATACTTA ACGATCCTTT GGATTATTTT
GAGCATCTCA TTGAGAGGTT GCCATTACAC TTTAAATATA CGCTTGTTGA AAATAGAAGT
GGGCAGGGGG CTTTGAGACG ACAGGTACAA GCAAGAACCC GTTATCCAAA TGGTGATAGC
AATATTAATT TGATTGCTCA AGAGTGGCCC GCTAATGTTT ATTCTCTATC ACATGTTGCC
ATCCCATTTC CTATTGAAGA TAGTTTATAT GGCCCTGAAG GGGTTAACTA CATCGATCGC
GTTCAAATAG GGGCCACATC TTCCAGAGGA GAGAGAGGAG TATTAGGGGT GCAAGCCGAT
GAGATGTTGA GGCAAAAGTG GAATCCATTT TTTCCCTATT TATTGGATAA AATGGATCGG
TTTATTGATA AACAAAATCT AGATTAA
|
|---|
| Protein sequence | MKTLVIGSTK HLLMALFYAS LGVVIALLCG SIWYLTSRAD LDVWHKTELK SAYKRSLEFD
NFSQLMALEQ VIFDEVEERI YGRTPHSFDS VINRYVRGSL SDPQKWRTDW NRSYEWPQAD
ADFGVLLLHG MSDSPYATSH LAKHFKGKAH VLALRLPGHG TIPSGLIDIE WQDIASAVSL
ATEHMQKVLK GKPLYLVGFS TGAALGLNHE LERLMKGQST DYSGMIFLSP AIGLSPVAAG
AKWQAWLGEL LGLEKLSWNS LQTEYDPFKY NSFAVNAGDV VYQLAMRNQW LLSQLSSEAL
LSLETSLTFQ SLVDDTVSTG AVVTDFYQKL PENGHELVIF DINRTEVNMG LILNDPLDYF
EHLIERLPLH FKYTLVENRS GQGALRRQVQ ARTRYPNGDS NINLIAQEWP ANVYSLSHVA
IPFPIEDSLY GPEGVNYIDR VQIGATSSRG ERGVLGVQAD EMLRQKWNPF FPYLLDKMDR
FIDKQNLD
|
|---|
| |