| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2728 |
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| Symbol | |
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| ID | 6117027 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 3342459 |
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| End bp | 3343598 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641634259 |
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| Product | porin |
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| Protein accession | YP_001761099 |
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| Protein GI | 170727073 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0767008 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.0000304831 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGAAACAAG CAAAGTTAAG CCTTATAGCA ATGGCGACGA TGTTGGCTGC AAGTTCTGCC
GCTGCTGGTG ATACAGAGTT TAAATTTGGC GGTTATGTAA AAGCTGATGT CATGTTTAGT
GATTATAGTA ACGGGGCACC TGATTCAGGA AGTTTATCCA GACAGTTTTA TGTACCTGGC
ACCATATACG GTGTAGAGGG AAACGGTGAG CAGGTCGTTG ACTTTCAAGC ACGTGAATCT
CGATTTAATT TTAAAACTTC AACAGATTTA GGTGGCCATA AGTTAAGTGG TTTTATTGAG
CTTGATTTCA TGACACATGC TGACGGTAAT GAACGTGTTT CAAATAGTTA CTCACCGCGT
ATTCGACATG CAATTGTGAG TTTTGACAAC TGGACGGTAG GTCAAACTTG GACAACTTTT
CAAAACCCTG GTGCACTACC TGAAAATTTA GATTTTGTTG GTGCAGCTGA GGGAACACCA
TTCGTTCGTC AAAGCATGGT GAGATACACC AATGGCGGAT TCCAGTTTGC AGTTGAGAAC
CCTGAAACTA CTTTAACGCC AAATGGCGGT GGTGGAAGGA TCACTAGCGG TAGCGGAATG
GTGCCTGACT TCGTGGCACG CTACAACTTC AAAACTGAGG GCGGTGCTAA GTTTACCGTT
GCAGGTTTAG CTAGGCAGCT TAATATAGAG AAAGATGGCT TGGATGCACA AACCTTAGGT
TACGGTGTCA GCTTTACTGG TGTAGTCCCC GTAGGTGATG ATGATTTTAA AGTCTCAGCA
ACTGTGGGTG ACGGTATGGG TCGCTATATG GCTCTTAACT ATGCCAATGC AGGTGTGATT
GATAACAATG GTGATATTGA AACCATTAGT TCATATGGCG GTTTTGCATC TTACCGTCAC
TGGTGGAATG ATAAGTGGCG CTCAAGCTTT ACTCTTTCAG GTTTTAAAGC TGATAACACT
GAATCACTAA CAGGGCTTGG CGTAAACAAG GAGTCCTACT CTGGGTATGT GAACTTACTC
TACTCACCAA TTAAGCCGAT GACTGTGGGT GTTGAGTATA TGTATGCCGA AAACACCAAA
GAGAGTGGTG ATAAAGGTGA GCTAAATAGA GTGATTTTCT CAGTGAAATA TGTACTTTAA
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| Protein sequence | MKQAKLSLIA MATMLAASSA AAGDTEFKFG GYVKADVMFS DYSNGAPDSG SLSRQFYVPG
TIYGVEGNGE QVVDFQARES RFNFKTSTDL GGHKLSGFIE LDFMTHADGN ERVSNSYSPR
IRHAIVSFDN WTVGQTWTTF QNPGALPENL DFVGAAEGTP FVRQSMVRYT NGGFQFAVEN
PETTLTPNGG GGRITSGSGM VPDFVARYNF KTEGGAKFTV AGLARQLNIE KDGLDAQTLG
YGVSFTGVVP VGDDDFKVSA TVGDGMGRYM ALNYANAGVI DNNGDIETIS SYGGFASYRH
WWNDKWRSSF TLSGFKADNT ESLTGLGVNK ESYSGYVNLL YSPIKPMTVG VEYMYAENTK
ESGDKGELNR VIFSVKYVL
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