| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2688 |
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| Symbol | |
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| ID | 6116987 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 3290885 |
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| End bp | 3294757 |
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| Gene Length | 3873 bp |
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| Protein Length | 1290 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641634219 |
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| Product | hypothetical protein |
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| Protein accession | YP_001761059 |
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| Protein GI | 170727033 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2911] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.246331 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.948604 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCAGA CTCCAGAGCA GTTAGCAAAA GTAGTTAGCC AAGAGCCGTT ACCAGCCCAA
GCCTCAACAG AACACAAAGC AGGAGTGTTA ACTCACTGCT GGCGAAGCTT TAAGGGGCTA
TGTAGGCTCC TCATTTACCT TCCGCTTGGC TTGTTAATCT TAATCGCCAT CTTAATTGGT
ACCGATTTCG GCAGCAGGAT CACGGTATTT CTGGCAGATG CATTCGTCCC CGACCTCAAC
ATCACCTATG TGAGCGGCAC CATCAATAAT CGCCTGGAGG TGAAAGATAC TCACTGGGGA
ATGGACGGTA TTACCGTCGA TGTAAATTCG CTACAACTGA CATGGCTGCC CATGTGTCTA
TTGAGAAAAC AGCTATGTGT TGATGAGCTT GTTGCATCAA ATATTCAGGT CGAAATTGAC
ACTGATAAAC TTGCACAAAG TGACCCCACA GACACTCCCT CCCCTAACAA CCTCCAAACC
GAGGATGAAG ATAATGTGGA GATCCAACTT CCTTTTGGGA TCGATCTTCA ACATGCCTCA
CTAGCAGGAG TTAAGGTTAG AGTCGATGAC ATGCAGTTTA ATGCCGAGAA CCTACAAACA
CAGGCTCAAT GGCAACAAAC GGGAATAAGA GTTAACCAGC TTAATAGTCA AGGTCTACTA
GTCTCTATCC CCTTGGAGAG CAAAGACACA GAGGTTTCCA CAGTAGAGCA AGAGGAGAGC
GAATGGGCCA TGGCTCATCT ACCGGAAGTG TTTATGCCAA TTCCGGTATT TGTTTCCGAT
GCCAAGTTCA CTGACAGCTT ACTTAAACTG GGACAACGAC AGGACAAGTT CAAACAGATA
AATCTACAAG CCAGCTATCA CAGTTTTCTC GTTCATGTTG AGCTGCTTGA GGTTGAACAC
ACCTATGGTA ACGCGAGTCT GGCAGGTGAA ATCTCCCTTA AAGCAGACTA CCCAATGGCA
CTCTCTGCTG TACTTGATGC TCAGCACATC GCTGAATTGC CAGAGCTCAA AGCCCAAAAG
CTCACGATAA ATGCAGAAGG TGGCTTTGAT AAACTCAATA TTACGGCAAC AGGCTCCGGC
CACATTGATC TGTCGCTCGA TGGCGATATT GCACTTTCAT CGCCAACACT GCCCTACCAC
CTGAAACTTA AGAGTGAGCG ATTAACTTGG CCACTCGATA ATCCCCTCTA TATAGGTGAA
TCGATTAACT TATCGAGCCA AGGCAATCTG AGTCATCAGT CAATCACGCT CACAAGCCTT
ATCAATACGC CCTATCAGCC TCAACTAGAT ATCGATACTG CGTTTGAACA TACAGCTCAG
CAAATAGAGA TAGCCCACCT TAATGCCAAA GGGAGTATTG GTGAACTTAT CGCTTCAGGC
AGTGCCAGCT ATGGAGATAA AATTGGCTGG GACGCTGATA TTAAGCTCAA TCAATTTAAG
ATGGAGCAGT TGGTTTTGGA GCTGGAAAAA CCACTACCAG CAAGCTCTAT CAGTGGTCAG
CTGCATACTC AAGGCACATT GGACAGTAAG CAGTGGCAGG TAGGGATAGC CCAATCAGAT
CTGCACGGTG AAATACAAGG TTACCCATTC GAGCTCCTAG GCGATGTCAC CATCAATAGT
AAGTTAAGTC TCAGTGCAAA CAGCCTAACA CTTAATGCTC TGCAATCGGC TTTACATCTC
TCAGGTGCGG TAAAAGATAC CTGGGCCGTC AATGCCTTGC TAGATATTCC TGATCTAGGC
CTTTGGCATC AGGATGCTTC AGGAAGTATT AAATCAAACA TTAAGGTTTC TGGACAGAGC
AGTCACCCGC AAATAGGGAT CATTGCTGAT GCATTAGATC TGCAATTTGA CCAGTTCGAG
CTTGAACATG CTCAAATCAA AGGCAACTAT CGACCGCTCG ATACCCATGA GTTTGCGCTC
TCAATGAACG CCAAAAAACT CACTTGGGAT GATATCGATA TCGACTCGGT CACCTTAGGG
GCAAAAGGTA ATGAAAGGGA GCAAAAACTA GGCTTACAAA GTTTCGGAGA GTTACAAGTT
GACTCAAAAA TCTATTCACG TTTCGACTCT AAAACAGAGA AACTGACCGC AGAGATAAAT
ACCTTTAGTG TTAACTCCAT AATGGGTCCT TGGTCGCTTG AATCTCCCTT CGACATCACG
TGGCAAAACC GTGAACAATC GGGCCTAGTA CAACCCTTTT GCTGGCAACA TAAAGAGGGC
AACTTATGCC TTAATGATCC CGCAGAACTC GGGGTTAAAG GCGACGCCAA TATTAGCTTC
AGCGGTGACT TAGGCTCTGT ACTTACCCCC TTCCTACCCG ATAATTTCGC CTGGGAAGCG
CCAGCTAAAC TCAACACACA ACTTGCGTGG CAAGCAAAAG GTAAACCCAC AGGTTTATTG
ACCCTTAACT TTGACCCAGG ACATATCAGT CTTAACAGCA ATAATCGTCA ATTAGATATA
GGCTACAAAC TGTTAAACCT ACAAGCAGCT CTTGATGAGA AAAAACTGTC GACTCAAGTC
AGCTTTGACT CCCATGATAT TGCCAGTTTA GAGGGGCAAC TTGATATTAA TGTGACCCCT
GACAGAACAC TTTCAGGTTA CACAAAACTG CATCAAATCA ACCTAGAAGC TTTATCGGAG
TTTATGCCGC AACTTGAGCG TCTCGCGGGC AAGATCTCCA GTGAACTCAC CATAGGTGGC
ACCTTGAGCA AACCCGATAT TTCTGGCGAG ATAGCACTAA AACAAGGCGA GCTACTTATC
ACAGCTAACC CTACGCAACT TGAAGATATC GACCTCTCCC TTAAACTCTC AGGACAGAAA
GCTAATGTTG ATGGGAACTG GCTTATGGGG GACGGTAAGG CGACACTCGA TGGTGTTATC
GATTGGGGTG GGGATGAACT AAATGGTGAT ATCTCATTTG ACGGTAACAA CCTGGCGATA
ATTCAACCGC CTCTAGCCTT ACTCAATGTA TCACCCAATC TAAAAATACA GTTTAAGAAA
CAGAGCTTAG ATATTCAGGG GGGTATCGAT ATTCCTTCAG GAAATATCAA GGTAGTTCAG
CTCCCTGAGG GCGGCGTAGC TGAATCCAGC GATGTGGTAT TTGAAGACAG CATCTCCTCA
GGCGAAAAGG AGCAGACACC GTTAGCCATC ACCTCAAATA TTCAGATTAA TGTGGCTGAT
AAGCTCAAAA TTGATGGTAT GGGCTTAAGA GGAAAACTCA CAGGTACACT GGATCTGAAA
CAGGAAGCGT TTAGGCCAGC TCAGCTCTAC GGTGACATTC GAGTCGTCGA CGGTAACTAC
AAATTTATGG GGCAAACATT AGAAATAAAA GCCGGTGAAG TGCAGTTTAT CGGCCCACTC
TCTATTCCAA ATCTAAATAT TGAGGCGGTC AGAGAGATCA AAGAGGAGGA CGTGGTTGCC
GGGGTTAGGA TCACAGGAAC TCCAATAAAA CCGATCGTAA CGCTATTCTC ATCGCCAACC
AAAGAGCAAG CTGAGATCCT CTCCTACATC ATCAAAGGAA CTGGTTTTCA CAGCAATGAC
AGCGATCAAA ATAGCAGTCT AATGATGGGC GCAGCACTAA CTTTAAGTAA TCAATTGGGC
GGCGGAGCAG TGAATAATAT CGGTAACTCA GCAACAACGC TTATTGAGAA GATGGGCTTT
TCAAACGTGC AGCTTGATGC CAATGATGAT GGTCGAGTGG CGATCAGTGG ATTTATCGGT
GAAGACTTAA TGGTTAAATA CGGTGTTGGT GTGTTTAATC CTGGTTATGA GGTGACAGTA
AGGTATTACC TACTATCACA ACTCTATCTC GAGACAGTAT CTGGTACCGT TGAACAATCT
CTGGATATCT ACTACAACTT CGATATTGAC TAA
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| Protein sequence | MSQTPEQLAK VVSQEPLPAQ ASTEHKAGVL THCWRSFKGL CRLLIYLPLG LLILIAILIG
TDFGSRITVF LADAFVPDLN ITYVSGTINN RLEVKDTHWG MDGITVDVNS LQLTWLPMCL
LRKQLCVDEL VASNIQVEID TDKLAQSDPT DTPSPNNLQT EDEDNVEIQL PFGIDLQHAS
LAGVKVRVDD MQFNAENLQT QAQWQQTGIR VNQLNSQGLL VSIPLESKDT EVSTVEQEES
EWAMAHLPEV FMPIPVFVSD AKFTDSLLKL GQRQDKFKQI NLQASYHSFL VHVELLEVEH
TYGNASLAGE ISLKADYPMA LSAVLDAQHI AELPELKAQK LTINAEGGFD KLNITATGSG
HIDLSLDGDI ALSSPTLPYH LKLKSERLTW PLDNPLYIGE SINLSSQGNL SHQSITLTSL
INTPYQPQLD IDTAFEHTAQ QIEIAHLNAK GSIGELIASG SASYGDKIGW DADIKLNQFK
MEQLVLELEK PLPASSISGQ LHTQGTLDSK QWQVGIAQSD LHGEIQGYPF ELLGDVTINS
KLSLSANSLT LNALQSALHL SGAVKDTWAV NALLDIPDLG LWHQDASGSI KSNIKVSGQS
SHPQIGIIAD ALDLQFDQFE LEHAQIKGNY RPLDTHEFAL SMNAKKLTWD DIDIDSVTLG
AKGNEREQKL GLQSFGELQV DSKIYSRFDS KTEKLTAEIN TFSVNSIMGP WSLESPFDIT
WQNREQSGLV QPFCWQHKEG NLCLNDPAEL GVKGDANISF SGDLGSVLTP FLPDNFAWEA
PAKLNTQLAW QAKGKPTGLL TLNFDPGHIS LNSNNRQLDI GYKLLNLQAA LDEKKLSTQV
SFDSHDIASL EGQLDINVTP DRTLSGYTKL HQINLEALSE FMPQLERLAG KISSELTIGG
TLSKPDISGE IALKQGELLI TANPTQLEDI DLSLKLSGQK ANVDGNWLMG DGKATLDGVI
DWGGDELNGD ISFDGNNLAI IQPPLALLNV SPNLKIQFKK QSLDIQGGID IPSGNIKVVQ
LPEGGVAESS DVVFEDSISS GEKEQTPLAI TSNIQINVAD KLKIDGMGLR GKLTGTLDLK
QEAFRPAQLY GDIRVVDGNY KFMGQTLEIK AGEVQFIGPL SIPNLNIEAV REIKEEDVVA
GVRITGTPIK PIVTLFSSPT KEQAEILSYI IKGTGFHSND SDQNSSLMMG AALTLSNQLG
GGAVNNIGNS ATTLIEKMGF SNVQLDANDD GRVAISGFIG EDLMVKYGVG VFNPGYEVTV
RYYLLSQLYL ETVSGTVEQS LDIYYNFDID
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