| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2429 |
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| Symbol | |
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| ID | 6116703 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 2974291 |
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| End bp | 2975583 |
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| Gene Length | 1293 bp |
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| Protein Length | 430 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641633937 |
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| Product | integrase family protein |
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| Protein accession | YP_001760802 |
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| Protein GI | 170726776 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.000369263 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTTAATGC CCCCAGTGTT ACCCCTATTT GAATCTTCAA TCCATATTCA TGAGGGGAAT
ACCTATATCA ACCAATACAT TACTCAAATC AGTATCAACC AAGTCGATGA TGCGGGGCTG
CTCTATGAGC ATGCAACTGA ACTCCTTTAT GAGCAGAAGA GTAACGAAAA TAGCTATAAA
GCTTATCGAA GTGAATTAAC GACCTTCTTT CATTGGTGTT TTGATGTCGC CAAACTTTCA
CCAGCAAAGC TCACGAGGAG AGAGATATCT CGCTATCTTG ATTATTGCGA GAACCCGCCC
AAAGCGTTAA TAGGCTACTT TAATGTCGCC CAGTTTAAGC TTGATAAAGC CAGCGGAGAC
AGGATGCCGA ATCCAGCTTG GCGACCCTTT GTTGGTAAAA AGAAGCTGGG CAAAGAGCAG
GACTATACGC TCAGTGAAAA CGCCTTAAAA ACCAAAGTCG CGATTCTCTC CTCCTTTTAT
AGCTACTTAA TGAGCGAGGA CTTTTGTGAA CGTAATCCAG CACAAGCTTG GATGAATCAC
AGCCGCTTCT CATCAAAGAA GAAGTACCAG ATAAAAGATG AAGAGGGCAG TATGCTCTCG
TTTACTGAGC TGCAATGGTC ATATGTGATC TCAACCGTCG AGCACCTGGC AAAAGAGCAA
CCTGAGCTTC ATCAGCGCAG CTTGTTTCTA ATTAAGCTTA TCTATTTCTG CTACCTGAGA
ATTTCAGAAG TCAGTGCAAG GGCGGGTTAC ACACCTGTGA TGGAGCAGTT CAGACAAAAC
AGCCAAACGG GGATCTGGAG CTTCTATATT CCACAAAGCA AAGGTGGCAA GCAGCGCTCC
GTCGCAATAT CAAAGGGGCT ATTAGCAGGG CTAGTTGAGT ACAGACGATT TCTGAAGCTT
CCAGATTTCC CGGTTATTGG CGAAAATCAC CCACTGTTTA TACGCCATCG TGCAGCTGGT
AGGGGCAGGG AAGTTGGCAC ACTTAACGCA AACCTAGGCA TACGCCAAAT TCGTGAAGAG
ATAGATAAGA TCATCGAAAA TGCAGCTAAA AGCATCGAAA ATGATGGATT ATTCGAAGAT
GCGTATCAGA TGAGAAAGTT AACCGCGCAT AATATTAGGC ACACAGGGAT CACCCACGAC
ATCAATATTA ATGGGCGGCC ACTGTCACAC GTACAAGCAG ACGCCGGCCA TGAGAGTATC
GATACCACCT CACAATATCT GCATACTTCA CAAATTGAGC GCCATCACAG CGCCCAGAAC
AAACCATTAG ATCACTTACA CGGTATCGAA TAA
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| Protein sequence | MLMPPVLPLF ESSIHIHEGN TYINQYITQI SINQVDDAGL LYEHATELLY EQKSNENSYK
AYRSELTTFF HWCFDVAKLS PAKLTRREIS RYLDYCENPP KALIGYFNVA QFKLDKASGD
RMPNPAWRPF VGKKKLGKEQ DYTLSENALK TKVAILSSFY SYLMSEDFCE RNPAQAWMNH
SRFSSKKKYQ IKDEEGSMLS FTELQWSYVI STVEHLAKEQ PELHQRSLFL IKLIYFCYLR
ISEVSARAGY TPVMEQFRQN SQTGIWSFYI PQSKGGKQRS VAISKGLLAG LVEYRRFLKL
PDFPVIGENH PLFIRHRAAG RGREVGTLNA NLGIRQIREE IDKIIENAAK SIENDGLFED
AYQMRKLTAH NIRHTGITHD ININGRPLSH VQADAGHESI DTTSQYLHTS QIERHHSAQN
KPLDHLHGIE
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